CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_8000473
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
fgenesh1_pm.C_scaffold_8000473
T019195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_8000473
B3
110
201
FVKSMLQSHVSGGFWLGLPVQFCRSHLGKQDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAIAHNLAYGDTLVFELVRRTAFKIYITRVG
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G42700
Arabidopsis thaliana
AT5G42700
N
0.946
Cagra.2329s0005
Capsella grandiflora
Cagra.2329s0005
N
0.859
Carubv10027266m.g
Capsella rubella
Carubv10027266m.g
N
0.859
Bostr.3148s0222
Boechera stricta
Bostr.3148s0222
N
0.837
Bra035324
Brassica rapa
Bra035324
N
0.750
Bo2g116250
Brassica oleracea
Bo2g116250
N
0.739
GLYMA06G04200
Glycine max
GLYMA06G04200
N
0.707
SapurV1A.0361s0280
Salix purpurea
SapurV1A.0361s0280
N
0.707