CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400025792
(
Solanum tuberosum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
PGSC0003DMG400025792
T020742_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400066323
B3
129
220
FVKPMLQSHVTGGFWLGLPVHFCKTHLPKHDEYVTLVDENGDEFQTKYLALKTGLSGGWRGFALDHELVDGDALVFQLVAPTRFKVYIIRVN
Links
Other
B3
family TFs
Other
Solanum tuberosum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.967
Cla016258
Citrullus lanatus
Cla016258
N
0.826
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.815
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.815
TCM_007039
Theobroma cacao
TCM_007039
N
0.804
VIT_03s0063g00620
Vitis vinifera
VIT_03s0063g00620
N
0.804
29801.m003200
Ricinus communis
29801.m003200
N
0.804
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.804
PK25650.1
Cannabis sativa
PK25650.1
N
0.804
POPTR_0009s10600
Populus trichocarpa
POPTR_0009s10600
N
0.793
Ciclev10029072m.g
Citrus clementina
Ciclev10029072m.g
N
0.783
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.783
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.783
mgf008645m
Mimulus guttatus
mgf008645m
N
0.772
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.772
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.772
SapurV1A.0090s0760
Salix purpurea
SapurV1A.0090s0760
N
0.772
cassava1104.valid.m1
Manihot esculenta
cassava1104.valid.m1
N
0.750
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.750
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.750
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.739
Bra035129
Brassica rapa
Bra035129
N
0.739
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.728
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.728
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.728
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.728
BGIOSGA011321
Oryza indica
BGIOSGA011321
N
0.717
GLYMA06G04200
Glycine max
GLYMA06G04200
N
0.717
LPERR03G05580
Leersia perrieri
LPERR03G05580
N
0.717
OB03G16290
Oryza brachyantha
OB03G16290
N
0.717
OBART03G06210
Oryza barthii
OBART03G06210
N
0.717
OGLUM03G06210
Oryza glumaepatula
OGLUM03G06210
N
0.717
OLONG_002463
Oryza longistaminata
OLONG_002463
N
0.717
ONIVA02G06710
Oryza nivara
ONIVA02G06710
N
0.717
ORGLA03G0060000
Oryza glaberrima
ORGLA03G0060000
N
0.717
ORUFI03G06050
Oryza rufipogon
ORUFI03G06050
N
0.717
OS03G0184500
Oryza sativa
OS03G0184500
N
0.717
Ca_01536
Cicer arietinum
Ca_01536
N
0.717
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.717
Aquca_016_00429
Aquilegia coerulea
Aquca_016_00429
N
0.707
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
0.707