CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g124000
(
Brassica oleracea
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bo6g124000
T018707_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g124000.1
B3
124
215
FIKPMLQSHVTGGFWLGLPRSFCHTHLPKYDEMITLVDENEDEAVTKYLADKNGLSGGWRGFAIDHQLVDGDAVVFHLINPTTFKVYIIRVN
Links
Other
B3
family TFs
Other
Brassica oleracea
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra035129
Brassica rapa
Bra035129
N
0.978
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.826
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.826
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.793
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.783
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.772
Cagra.5742s0010
Capsella grandiflora
Cagra.5742s0010
N
0.772
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.772
mgf008645m
Mimulus guttatus
mgf008645m
N
0.761
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.750
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.750
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.739
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.728
Sb07g006170
Sorghum bicolor
Sb07g006170
N
0.728
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.728
Cla016258
Citrullus lanatus
Cla016258
N
0.728
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.728
F775_06135
Aegilops tauschii
F775_06135
N
0.717
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.717
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
0.717
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N
0.717
29801.m003200
Ricinus communis
29801.m003200
N
0.717
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
0.717
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
0.717
orange1.1g026276m.g
Citrus sinensis
orange1.1g026276m.g
N
0.717
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.717
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.717
PK25650.1
Cannabis sativa
PK25650.1
N
0.717
BRADI1G45517
Brachypodium distachyon
BRADI1G45517
N
0.707
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
0.707
Ciclev10029072m.g
Citrus clementina
Ciclev10029072m.g
N
0.707
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.707