CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10029072m.g
(
Citrus clementina
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Ciclev10029072m.g
T022973_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10029072m
B3
129
220
FVKPMLQSHVTGGFWLGLPVHFCKEHLPHSDEIVTLVDEEENEFPTKYLAEKTGLSGGWRGFSIDHELVDGDCLVFQLIKPATFKVYIIRVY
Links
Other
B3
family TFs
Other
Citrus clementina
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.989
Cla016258
Citrullus lanatus
Cla016258
N
0.804
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.783
TCM_007039
Theobroma cacao
TCM_007039
N
0.783
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.783
VIT_03s0063g00620
Vitis vinifera
VIT_03s0063g00620
N
0.772
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.772
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.750
mgf008645m
Mimulus guttatus
mgf008645m
N
0.750
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
0.750
POPTR_0009s10600
Populus trichocarpa
POPTR_0009s10600
N
0.739
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
0.739
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.739
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.739
PK25650.1
Cannabis sativa
PK25650.1
N
0.739
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.728
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.728
SapurV1A.0090s0760
Salix purpurea
SapurV1A.0090s0760
N
0.717
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.717
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.707
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.707
Bra035129
Brassica rapa
Bra035129
N
0.707
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.707
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
0.707
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.707