17269_YMR016C (Saccharomyces paradoxus)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 17269_YMR016C T013955_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.880 1.000
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.880 1.000
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.880 1.000
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17269_YMR016C APSES 434 525

Links

Other APSES family TFs
Other Saccharomyces paradoxus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.655
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.685
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.851
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.846
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.774
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.774
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.732
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.733
CaO19.610 Candida albicans CaO19.610 I 0.707
CaO19.8243 Candida albicans CaO19.8243 I 0.707
CD36_33560 Candida dubliniensis CD36_33560 I 0.707
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.726
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.726
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.707
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.707
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.707
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.740
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.707
G210_4810 Candida maltosa G210_4810 I 0.707
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.707
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.707
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.687
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.692
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.681
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.735
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.693
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.797
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.702
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.702
Kpol_460p25 Vanderwaltozyma polyspora Kpol_460p25 I 0.687
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.709
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.792
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.766
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.707
NDAI_0K01760 Naumovozyma dairenensis NDAI_0K01760 I 0.661
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.702
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.707
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.707
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.707
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.800
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.834
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.659
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.707
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.863
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.729
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.702
YALI0_D01573g Yarrowia lipolytica YALI0_D01573g I 0.659
SOK2 Saccharomyces cerevisiae YMR016C D 0.880
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.687
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.687
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.747