PAS_chr1-4_0530 (Komagataella pastoris)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 PAS_chr1-4_0530 T012169_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOK2
M00007_2.00 		Saccharomyces cerevisiae
NCMTGCAKGNN
NNCMTGCAKGN		 PBM
Badis et al.(2008)
SOK2_4560 		0.702 0.793
SOK2
M07438_2.00 		Saccharomyces cerevisiae
NNBMTGCAKNN
NNMTGCAKVNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0385.1 		0.702 0.793
SOK2
M08477_2.00 		Saccharomyces cerevisiae
HNBCTGCR
YGCAGVND		 Misc
DeBoer et al.(2011)
YMR016C_404 		0.702 0.793
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.691 0.770
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.691 0.770
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.691 0.770
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.691 0.770
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.691 0.770
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.691 0.770
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.691 0.770
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.691 0.770
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY68383 APSES 296 387

Links

Other APSES family TFs
Other Komagataella pastoris TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.880
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.845
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.804
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.804
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.798
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.795
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.786
CaO19.610 Candida albicans CaO19.610 I 0.786
CaO19.8243 Candida albicans CaO19.8243 I 0.786
CD36_33560 Candida dubliniensis CD36_33560 I 0.786
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.786
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.786
G210_4810 Candida maltosa G210_4810 I 0.786
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.786
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.786
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.786
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.786
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.786
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.774
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.774
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.773
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.773
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.768
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.759
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.756
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.746
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.743
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.743
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.737
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.737
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.731
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.728
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.728
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.712
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.710
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.710
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.709
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.708
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.707
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.704
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.704
SOK2 Saccharomyces cerevisiae YMR016C D 0.702
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.702
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.702
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.699
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.697
PHD1 Saccharomyces cerevisiae YKL043W D 0.691
SU7_2011 Saccharomyces arboricola SU7_2011 I 0.690
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.682
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.682
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.682
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I 0.661
EV44_g0662 Erysiphe necator EV44_g0662 I 0.653
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.651
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.651