estExt_Genewise1.C_60341 (Heterobasidion annosum)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1.C_60341 T013975_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU07587
M01654_2.00
Neurospora crassa
NNNDCRCGN

NCGYGHNNN
PBM
Weirauch et al.(2014)
pTH9687
0.734 0.680
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00
PBM CONSTRUCTS
NNACGCGW

WCGCGTNN
PBM
Lambert et al.(2019)
pTH9838
0.708 0.640
MBP1
M00003_2.00
Saccharomyces cerevisiae
VACGCGWD

HWCGCGTB
PBM
Badis et al.(2008)
MBP1_4486
0.697 0.467
MBP1
M01514_2.00
Saccharomyces cerevisiae
NNNNDCRCGH

DCGYGHNNNN
PBM
Zhu et al.(2009)
Mbp1
0.697 0.467
MBP1
M07434_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1
0.697 0.467
MBP1
M08472_2.00
Saccharomyces cerevisiae
NDCGCGH

DCGCGHN
Misc
DeBoer et al.(2011)
YDL056W_500
0.697 0.467
NCU07246
M01653_2.00
Neurospora crassa
NDCRCGN

NCGYGHN
PBM
Weirauch et al.(2014)
pTH8957
0.664 0.467
ANIA_03154
M01650_2.00
Aspergillus nidulans
NNACGCG

CGCGTNN
PBM
Weirauch et al.(2014)
pTH8232
0.659 0.400
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_60341 APSES 3 79

Links

Other APSES family TFs
Other Heterobasidion annosum TFs

412 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30178.m000864 Ricinus communis 30178.m000864 N
AT3G07500 Arabidopsis thaliana AT3G07500 N
Bo5g141470 Brassica oleracea Bo5g141470 N
Bostr.22252s0282 Boechera stricta Bostr.22252s0282 N
Cagra.0133s0093 Capsella grandiflora Cagra.0133s0093 N
Carubv10014621m.g Capsella rubella Carubv10014621m.g N
Ciclev10016654m.g Citrus clementina Ciclev10016654m.g N
Cla015099 Citrullus lanatus Cla015099 N
Cucsa.388100 Cucumis sativus Cucsa.388100 N
Eucgr.K02085 Eucalyptus grandis Eucgr.K02085 N
evm.TU.supercontig_8.53 Carica papaya evm.TU.supercontig_8.53 N
gene17500-v1.0-hybrid Fragaria vesca gene17500-v1.0-hybrid N
Gorai.N002600 Gossypium raimondii Gorai.N002600 N
MDP0000123745 Malus domestica MDP0000123745 N
MDP0000156730 Malus domestica MDP0000156730 N
MDP0000243502 Malus domestica MDP0000243502 N
mgf009623m Mimulus guttatus mgf009623m N
orange1.1g028717m.g Citrus sinensis orange1.1g028717m.g N
POPTR_0014s17500 Populus trichocarpa POPTR_0014s17500 N
PRUPE_ppa011264mg Prunus persica PRUPE_ppa011264mg N
SapurV1A.0137s0280 Salix purpurea SapurV1A.0137s0280 N
scaffold_300886.1 Arabidopsis lyrata scaffold_300886.1 N
TCM_002647 Theobroma cacao TCM_002647 N
VIT_00s0269g00010 Vitis vinifera VIT_00s0269g00010 N