CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_07957
(
Verticillium albo atrum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
VDBG_07957
T014060_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03892
M01670_2.00
Neurospora crassa
HAAATTTD
HAAATTTD
PBM
Weirauch et al.(2014)
pTH8975
0.476
0.563
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_07957T0
ARID/BRIGHT
17
105
EYEEFMTKLRAYHQQRGTTLDPEPKCSTVNLDLYKLFNLIVEEGGYDEVSDRKLAWREMVEKLGIPMTSIASTAYQLKDRYLKNLAAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Verticillium albo atrum
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_01590
Colletotrichum fioriniae
CFIO01_01590
N
0.000
CGGC5_594
Colletotrichum gloeosporioides
CGGC5_594
N
0.000
CH063_03168
Colletotrichum higginsianum
CH063_03168
N
0.000
Cob_11179
Colletotrichum orbiculare
Cob_11179
N
0.000
CSUB01_09602
Colletotrichum sublineola
CSUB01_09602
N
0.000
VDAG_01084
Verticillium dahliae
VDAG_01084
N
0.000
VDBG_03857
Verticillium albo atrum
VDBG_03857
N
0.000
VDBG_03857
Verticillium alfalfae
VDBG_03857
N
0.000