CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03857
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_03857
T357987_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03857T0
Zinc cluster
9
48
GGCKLCKLRRIKCDEAKPFCMKCKKAKRDCPGYSDPFEAK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_01084
Verticillium dahliae
VDAG_01084
N
0.683
VDBG_03857
Verticillium alfalfae
VDBG_03857
N
0.683
CFIO01_01590
Colletotrichum fioriniae
CFIO01_01590
N
0.634
CGGC5_594
Colletotrichum gloeosporioides
CGGC5_594
N
0.634
Cob_11179
Colletotrichum orbiculare
Cob_11179
N
0.634
CSUB01_09602
Colletotrichum sublineola
CSUB01_09602
N
0.634
GLRG_00561
Colletotrichum graminicola
GLRG_00561
N
0.634
CH063_03168
Colletotrichum higginsianum
CH063_03168
N
0.609