CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g012540
(
Brassica oleracea
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
Bo4g012540
T014203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g012540.1
ARID/BRIGHT
7
97
PLSSSSFSSTLPLPPMTSDGRSMDFLRLSINVSNRGGFKAVSENVAWDEEQSSNGFLSKTKKLEKFDSGSNKDRSSNGKRKRECFVETLKW
Links
Other
ARID/BRIGHT
family TFs
Other
Brassica oleracea
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30055.m001548
Ricinus communis
30055.m001548
I
DPBF2
Arabidopsis thaliana
AT3G44460
I
Bo3g122120
Brassica oleracea
Bo3g122120
I
Bostr.0556s0737
Boechera stricta
Bostr.0556s0737
I
Bra019436
Brassica rapa
Bra019436
I
BRADI2G55550
Brachypodium distachyon
BRADI2G55550
I
Cagra.2192s0012
Capsella grandiflora
Cagra.2192s0012
I
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
DPBF2
Arabidopsis lyrata
fgenesh2_kg.5__854__AT3G44460.1
I
Gorai.013G258300
Gossypium raimondii
Gorai.013G258300
I
MTR_6g026800
Medicago truncatula
MTR_6g026800
I
PK24205.1
Cannabis sativa
PK24205.1
D
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
Thhalv10011159m.g
Eutrema salsugineum
Thhalv10011159m.g
I