CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10011159m.g
(
Eutrema salsugineum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Thhalv10011159m.g
T072658_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.796
0.600
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10011159m
bZIP
256
315
MERRQRRMIKNRESAARSRARRQAYTVELELELNQLTEENMKLKTIVEENEKKRRQEFNN
Links
Other
bZIP
family TFs
Other
Eutrema salsugineum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.0556s0737
Boechera stricta
Bostr.0556s0737
I
0.828
Cagra.2192s0012
Capsella grandiflora
Cagra.2192s0012
I
0.828
Carubv10019243m.g
Capsella rubella
Carubv10019243m.g
I
0.828
DPBF2
Arabidopsis thaliana
AT3G44460
I
0.828
DPBF2
Arabidopsis lyrata
fgenesh2_kg.5__854__AT3G44460.1
I
0.828
Bo3g122120
Brassica oleracea
Bo3g122120
I
0.828
Bra019436
Brassica rapa
Bra019436
I
0.807
PK24205.1
Cannabis sativa
PK24205.1
D
0.796
MTR_6g026800
Medicago truncatula
MTR_6g026800
I
0.784
Gorai.013G258300
Gossypium raimondii
Gorai.013G258300
I
0.783