Arid5b (Mus musculus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSMUSG00000019947 T014643_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5b
M01661_2.00		 Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426		 (Direct) (Direct)
Arid5b
M08708_2.00		 Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.785 1.000
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.785 1.000
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.632 0.744
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.632 0.744
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.605 0.605
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.482 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01661_2.00 ARID/BRIGHT 21 107

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000020106 ARID/BRIGHT 321 407

Links

Other ARID/BRIGHT family TFs
Other Mus musculus TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05801 Capronia coronata A1O1_05801 I 0.000
A1O3_03555 Capronia epimyces A1O3_03555 I 0.000
A1O5_06619 Cladophialophora psammophila A1O5_06619 I 0.000
A1O7_00849 Cladophialophora yegresii A1O7_00849 I 0.000
AB07639.1 Alternaria brassicicola AB07639.1 I 0.000
BAUCODRAFT_118684 Baudoinia compniacensis BAUCODRAFT_118684 I 0.000
BDDG_02608 Blastomyces dermatitidis BDDG_02608 I 0.000
ACLA_026280 Aspergillus clavatus CADACLAG00002102 I 0.000
AFUA_1G09190 Aspergillus fumigatus CADAFUAG00007026 I 0.000
CADANGAG00006390 Aspergillus niger CADANGAG00006390 I 0.000
ANIA_01368 Aspergillus nidulans CADANIAG00001243 D 0.000
CIMG_07148 Coccidioides immitis CIMG_07148 I 0.000
COCC4DRAFT_30331 Bipolaris maydis COCC4DRAFT_30331 I 0.000
COCCADRAFT_33156 Bipolaris zeicola COCCADRAFT_33156 I 0.000
COCMIDRAFT_82593 Bipolaris oryzae COCMIDRAFT_82593 I 0.000
COCSADRAFT_39114 Bipolaris sorokiniana COCSADRAFT_39114 I 0.000
COCVIDRAFT_17657 Bipolaris victoriae COCVIDRAFT_17657 I 0.000
CPC735_034820 Coccidioides posadasii CPC735_034820 I 0.000
DOTSEDRAFT_77016 Dothistroma septosporum DOTSEDRAFT_77016 I 0.000
EPUS_02475 Endocarpon pusillum EPUS_02475 N 0.000
EURHEDRAFT_506166 Aspergillus ruber EURHEDRAFT_506166 I 0.000
e_gw1.00083.502.1 Aspergillus carbonarius e_gw1.00083.502.1 I 0.000
G647_00903 Cladophialophora carrionii G647_00903 I 0.000
HCBG_05364 Histoplasma capsulatum HCBG_05364 I 0.000
HMPREF1120_02804 Exophiala dermatitidis HMPREF1120_02804 I 0.000
HMPREF1541_00475 Cyphellophora europaea HMPREF1541_00475 I 0.000
PABG_06647 Paracoccidioides brasiliensis PABG_06647 I 0.000
Pc16g02310 Penicillium chrysogenum Pc16g02310 I 0.000
PCH_Pc16g02310 Penicillium rubens PCH_Pc16g02310 I 0.000
PDE_06784 Penicillium oxalicum PDE_06784 I 0.000
PDIP_41390 Penicillium digitatum PDIP_41390 I 0.000
PMAA_045800 Penicillium marneffei PMAA_045800 I 0.000
PMAA_045800 Talaromyces marneffei PMAA_045800 I 0.000
PTRG_00425 Pyrenophora triticirepentis PTRG_00425 I 0.000
PV04_01175 Capronia semiimmersa PV04_01175 I 0.000
PV05_11903 Exophiala xenobiotica PV05_11903 N 0.000
PV06_02913 Exophiala oligosperma PV06_02913 I 0.000
PV07_02125 Cladophialophora immunda PV07_02125 I 0.000
PV09_09353 Verruconis gallopava PV09_09353 I 0.000
PV10_08753 Exophiala mesophila PV10_08753 I 0.000
PV11_07970 Exophiala sideris PV11_07970 I 0.000
PVAR5_4509 Byssochlamys spectabilis PVAR5_4509 I 0.000
SETTUDRAFT_97479 Setosphaeria turcica SETTUDRAFT_97479 I 0.000
TSTA_035040 Talaromyces stipitatus TSTA_035040 I 0.000
UREG_05754 Uncinocarpus reesii UREG_05754 I 0.000
Z517_07725 Fonsecaea pedrosoi Z517_07725 I 0.000
Z519_09046 Cladophialophora bantiana Z519_09046 I 0.000