ARID5B (Sus scrofa)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSSSCG00000010219 T014776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.785 0.988
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.785 0.988
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.785 0.988
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.785 0.988
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.632 0.733
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.632 0.733
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.605 0.616
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.482 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000010895 ARID/BRIGHT 78 164

Links

Other ARID/BRIGHT family TFs
Other Sus scrofa TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01341 Capronia coronata A1O1_01341 N 0.000
A1O3_08861 Capronia epimyces A1O3_08861 N 0.000
A1O5_12280 Cladophialophora psammophila A1O5_12280 N 0.000
A1O7_01784 Cladophialophora yegresii A1O7_01784 N 0.000
A1O9_00929 Exophiala aquamarina A1O9_00929 N 0.000
BBA_02247 Beauveria bassiana BBA_02247 N 0.000
Bcin05g00980 Botrytis cinerea Bcin05g00980 N 0.000
ACLA_046870 Aspergillus clavatus CADACLAG00004684 N 0.000
CADAFLAG00004963 Aspergillus flavus CADAFLAG00004963 N 0.000
AFUA_4G07560 Aspergillus fumigatus CADAFUAG00008022 N 0.000
CADANGAG00003904 Aspergillus niger CADANGAG00003904 N 0.000
ANIA_04472 Aspergillus nidulans CADANIAG00005974 N 0.000
CADAORAG00007908 Aspergillus oryzae CADAORAG00007908 N 0.000
ATEG_05447 Aspergillus terreus CADATEAG00003680 N 0.000
NFIA_108640 Neosartorya fischeri CADNFIAG00010194 N 0.000
CFIO01_10218 Colletotrichum fioriniae CFIO01_10218 N 0.000
CGGC5_504 Colletotrichum gloeosporioides CGGC5_504 N 0.000
CH063_07253 Colletotrichum higginsianum CH063_07253 N 0.000
CIMG_09550 Coccidioides immitis CIMG_09550 N 0.000
Cob_10011 Colletotrichum orbiculare Cob_10011 N 0.000
CPC735_018970 Coccidioides posadasii CPC735_018970 N 0.000
CPUR_05002 Claviceps purpurea CPUR_05002 N 0.000
CSUB01_06218 Colletotrichum sublineola CSUB01_06218 N 0.000
EPUS_00195 Endocarpon pusillum EPUS_00195 N 0.000
estExt_fgenesh1_pg.C_10908 Cryphonectria parasitica estExt_fgenesh1_pg.C_10908 N 0.000
estExt_Genewise1.C_200094 Neurospora discreta estExt_Genewise1.C_200094 N 0.000
EURHEDRAFT_412596 Aspergillus ruber EURHEDRAFT_412596 N 0.000
EV44_g2608 Erysiphe necator EV44_g2608 N 0.000
e_gw1.00609.14.1 Aspergillus carbonarius e_gw1.00609.14.1 N 0.000
FFUJ_08647 Fusarium fujikuroi FFUJ_08647 N 0.000
fgenesh1_pm.sca_10_chr8_2_0000183 Nectria haematococca fgenesh1_pm.sca_10_chr8_2_0000183 N 0.000
FGRRES_05512 Fusarium graminearum FGRRES_05512 N 0.000
FPSE_05177 Fusarium pseudograminearum FPSE_05177 N 0.000
FVEG_07013 Fusarium verticillioides FVEG_07013 N 0.000
G647_10033 Cladophialophora carrionii G647_10033 N 0.000
GGTG_08239 Gaeumannomyces graminis GGTG_08239 N 0.000
GLRG_00137 Colletotrichum graminicola GLRG_00137 N 0.000
GMDG_05133 Pseudogymnoascus destructans GMDG_05133 N 0.000
HMPREF1120_00355 Exophiala dermatitidis HMPREF1120_00355 N 0.000
HMPREF1541_06366 Cyphellophora europaea HMPREF1541_06366 N 0.000
M7I_2968 Glarea lozoyensis M7I_2968 N 0.000
MAC_02538 Metarhizium acridum MAC_02538 N 0.000
MAM_01486 Metarhizium album MAM_01486 N 0.000
MANI_110882 Metarhizium anisopliae MANI_110882 N 0.000
MAPG_08031 Magnaporthe poae MAPG_08031 N 0.000
MBR_07690 Metarhizium brunneum MBR_07690 N 0.000
MCYG_07183 Microsporum canis MCYG_07183 N 0.000
MCYG_07183 Arthroderma otae MCYG_07183 N 0.000
MGU_03961 Metarhizium guizhouense MGU_03961 N 0.000
NCU07863 Neurospora crassa NCU07863 N 0.000
NechaG95544 Fusarium solani NechaG95544 N 0.000
NEUTE1DRAFT_80970 Neurospora tetrasperma NEUTE1DRAFT_80970 N 0.000
OCS_05069 Ophiocordyceps sinensis OCS_05069 N 0.000
OIDMADRAFT_143331 Oidiodendron maius OIDMADRAFT_143331 N 0.000
Pc22g18960 Penicillium chrysogenum Pc22g18960 N 0.000
PCH_Pc22g18960 Penicillium rubens PCH_Pc22g18960 N 0.000
PDE_03679 Penicillium oxalicum PDE_03679 N 0.000
PDIP_12360 Penicillium digitatum PDIP_12360 N 0.000
PEX1_089410 Penicillium expansum PEX1_089410 N 0.000
PFICI_11537 Pestalotiopsis fici PFICI_11537 N 0.000
PITC_006180 Penicillium italicum PITC_006180 N 0.000
PMAA_094090 Penicillium marneffei PMAA_094090 N 0.000
PMAA_094090 Talaromyces marneffei PMAA_094090 N 0.000
PV04_00132 Capronia semiimmersa PV04_00132 N 0.000
PV05_09469 Exophiala xenobiotica PV05_09469 N 0.000
PV06_05828 Exophiala oligosperma PV06_05828 N 0.000
PV07_09526 Cladophialophora immunda PV07_09526 N 0.000
PV08_09594 Exophiala spinifera PV08_09594 N 0.000
PV10_02096 Exophiala mesophila PV10_02096 N 0.000
PV11_09323 Exophiala sideris PV11_09323 N 0.000
PVAR5_5058 Byssochlamys spectabilis PVAR5_5058 N 0.000
SBOR_5966 Sclerotinia borealis SBOR_5966 N 0.000
SMAC_02137 Sordaria macrospora SMAC_02137 N 0.000
SS1G_05982 Sclerotinia sclerotiorum SS1G_05982 N 0.000
TRIATDRAFT_283367 Trichoderma atroviride TRIATDRAFT_283367 N 0.000
TRIVIDRAFT_43538 Trichoderma virens TRIVIDRAFT_43538 N 0.000
TSTA_047120 Talaromyces stipitatus TSTA_047120 N 0.000
UCRPA7_1672 Togninia minima UCRPA7_1672 N 0.000
UV8b_1287 Ustilaginoidea virens UV8b_1287 N 0.000
V499_07367 Pseudogymnoascus pannorum V499_07367 N 0.000
VHEMI08803 Torrubiella hemipterigena VHEMI08803 N 0.000
W97_04181 Coniosporium apollinis W97_04181 N 0.000
X797_003194 Metarhizium robertsii X797_003194 N 0.000
Z517_02112 Fonsecaea pedrosoi Z517_02112 N 0.000
Z518_04555 Rhinocladiella mackenziei Z518_04555 N 0.000
Z519_04474 Cladophialophora bantiana Z519_04474 N 0.000