SPU_011640 (Strongylocentrotus purpuratus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 SPU_011640 T015660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.538 0.651
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.538 0.651
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.538 0.651
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.538 0.651
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.520 0.616
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.492 0.570
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.492 0.570
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_011640-tr ARID/BRIGHT 178 264

Links

Other ARID/BRIGHT family TFs
Other Strongylocentrotus purpuratus TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cob_05273 Colletotrichum orbiculare Cob_05273 N 0.000
COCC4DRAFT_72641 Bipolaris maydis COCC4DRAFT_72641 N 0.000
COCCADRAFT_83231 Bipolaris zeicola COCCADRAFT_83231 N 0.000
COCMIDRAFT_107123 Bipolaris oryzae COCMIDRAFT_107123 I 0.000
COCMIDRAFT_39900 Bipolaris oryzae COCMIDRAFT_39900 N 0.000
COCSADRAFT_171845 Bipolaris sorokiniana COCSADRAFT_171845 N 0.000
COCVIDRAFT_33636 Bipolaris victoriae COCVIDRAFT_33636 N 0.000
estExt_Genewise1.C_10564 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10564 N 0.000
GSTUM_00011438001 Tuber melanosporum GSTUM_00011438001 N 0.000
MGG_09273 Magnaporthe oryzae MGG_09273 N 0.000
PV06_08981 Exophiala oligosperma PV06_08981 N 0.000
PV07_04845 Cladophialophora immunda PV07_04845 I 0.000
PV11_02024 Exophiala sideris PV11_02024 N 0.000
SETTUDRAFT_22160 Setosphaeria turcica SETTUDRAFT_22160 N 0.000
TRIATDRAFT_31829 Trichoderma atroviride TRIATDRAFT_31829 I 0.000