VIT_18s0122g00560 (Vitis vinifera)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 VIT_18s0122g00560 T015794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.667 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.659 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0122g00560.t01 ARID/BRIGHT 155 240

Links

Other ARID/BRIGHT family TFs
Other Vitis vinifera TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000922801 Ascaris lumbricoides ALUE_0000922801 N
ASU_02073 Ascaris suum ASU_02073 N
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I
L596_g27594 Steinernema carpocapsae L596_g27594 N
L889_g21170 Steinernema feltiae L889_g21170 N
L892_g15823 Steinernema scapterisci L892_g15823 N
L898_g30838 Steinernema monticolum L898_g30838 N
SMUV_0000241401 Syphacia muris SMUV_0000241401 I
SMUV_0000241501 Syphacia muris SMUV_0000241501 N