AMTR_s00114p00142630 (Amborella trichopoda)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AMTR_s00114p00142630 T018362_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM98946 B3 9 109

Links

Other B3 family TFs
Other Amborella trichopoda TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014331 Ricinus communis 30147.m014331 I
BGIOSGA005915 Oryza indica BGIOSGA005915 I
BGIOSGA014605 Oryza indica BGIOSGA014605 I
cassava47034.m1 Manihot esculenta cassava47034.m1 I
Ciclev10005891m.g Citrus clementina Ciclev10005891m.g I
ERF2_TOBAC Nicotiana tabacum ERF2_TOBAC D
Eucgr.A02924 Eucalyptus grandis Eucgr.A02924 I
evm.TU.supercontig_13.250 Carica papaya evm.TU.supercontig_13.250 I
evm.TU.supercontig_194.13 Carica papaya evm.TU.supercontig_194.13 I
e_gw1.357.22.1 Physcomitrella patens e_gw1.357.22.1 I
Gorai.001G051300 Gossypium raimondii Gorai.001G051300 I
Gorai.004G195300 Gossypium raimondii Gorai.004G195300 I
Gorai.007G046000 Gossypium raimondii Gorai.007G046000 I
GRMZM2G055180 Zea mays GRMZM2G055180 I
GRMZM2G080516 Zea mays GRMZM2G080516 I
gw1.2.361.1 Physcomitrella patens gw1.2.361.1 I
LPERR02G21460 Leersia perrieri LPERR02G21460 I
LPERR04G16740 Leersia perrieri LPERR04G16740 I
MDP0000517257 Malus domestica MDP0000517257 I
mgf020878m Mimulus guttatus mgf020878m I
mgf026054m Mimulus guttatus mgf026054m I
OGLUM02G26840 Oryza glumaepatula OGLUM02G26840 I
OGLUM04G20600 Oryza glumaepatula OGLUM04G20600 I
OMERI02G25760 Oryza meridionalis OMERI02G25760 I
OMERI04G17100 Oryza meridionalis OMERI04G17100 I
ONIVA02G28810 Oryza nivara ONIVA02G28810 I
ONIVA04G18900 Oryza nivara ONIVA04G18900 I
OPUNC02G24070 Oryza punctata OPUNC02G24070 I
OPUNC04G18300 Oryza punctata OPUNC04G18300 I
orange1.1g028566m.g Citrus sinensis orange1.1g028566m.g I
ORGLA02G0226500 Oryza glaberrima ORGLA02G0226500 I
ORGLA04G0177100 Oryza glaberrima ORGLA04G0177100 I
ORUFI02G27830 Oryza rufipogon ORUFI02G27830 I
ORUFI04G22230 Oryza rufipogon ORUFI04G22230 I
OS02G0654700 Oryza sativa OS02G0654700 I
OS04G0546800 Oryza sativa OS04G0546800 I
Pavir.Ga01099 Panicum virgatum Pavir.Ga01099 I
Pavir.Gb00956 Panicum virgatum Pavir.Gb00956 I
PGSC0003DMG400010750 Solanum tuberosum PGSC0003DMG400010750 I
PGSC0003DMG400016006 Solanum tuberosum PGSC0003DMG400016006 I
PK28774.1 Cannabis sativa PK28774.1 I
Pm019546 Prunus mume Pm019546 I
POPTR_0003s15030 Populus trichocarpa POPTR_0003s15030 I
PRUPE_ppa010186mg Prunus persica PRUPE_ppa010186mg I
SapurV1A.0059s0630 Salix purpurea SapurV1A.0059s0630 I
Sb06g024355 Sorghum bicolor Sb06g024355 I
Si030692m.g Setaria italica Si030692m.g I
Solyc03g093610.1 Solanum lycopersicum Solyc03g093610.1 I
Solyc05g052050.1 Solanum lycopersicum Solyc05g052050.1 I
TCM_014845 Theobroma cacao TCM_014845 I
Traes_2AL_158F8EE88 Triticum aestivum Traes_2AL_158F8EE88 I
Traes_2BL_CF47A74CC Triticum aestivum Traes_2BL_CF47A74CC I
VIT_16s0013g00890 Vitis vinifera VIT_16s0013g00890 I