Bra018854 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra018854 T018851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018854.1-P B3 172 282

Links

Other B3 family TFs
Other Brassica rapa TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMEM007577 Anopheles merus AMEM007577 N
Bm4268 Brugia malayi Bm4268 N
CGI_10022678 Crassostrea gigas CGI_10022678 N
EEL_0000200601 Elaeophora elaphi EEL_0000200601 N
MYT1L Callithrix jacchus ENSCJAG00000007286 N
MYT1L Homo sapiens ENSG00000186487 I
MYT1L Macaca mulatta ENSMMUG00000009310 I
L3MBTL1 Procavia capensis ENSPCAG00000013248 N
estExt_fgenesh2_pg.C_5980016 Branchiostoma floridae estExt_fgenesh2_pg.C_5980016 N
estExt_gwp.C_5980021 Branchiostoma floridae estExt_gwp.C_5980021 N
GPLIN_000814800 Globodera pallida GPLIN_000814800 N
GPLIN_001349600 Globodera pallida GPLIN_001349600 N
HPBE_0001834901 Heligmosomoides bakeri HPBE_0001834901 N
L892_g7301 Steinernema scapterisci L892_g7301 N
L898_g12863 Steinernema monticolum L898_g12863 N
maker-nMf.1.1.scaf02509-snap-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf02509-snap-gene-0.6 N
MESCA002178 Megaselia scalaris MESCA002178 N
nAv.1.0.1.g04361 Acanthocheilonema viteae nAv.1.0.1.g04361 N
nOo.2.0.1.g09682 Onchocerca ochengi nOo.2.0.1.g09682 N
Ocbimv22011176m.g Octopus bimaculoides Ocbimv22011176m.g N
PPAI004584 Phlebotomus papatasi PPAI004584 N
PXEA_0001827501 Protopolystoma xenopodis PXEA_0001827501 N
PXEA_0003323301 Protopolystoma xenopodis PXEA_0003323301 N
SVUK_0001589601 Strongylus vulgaris SVUK_0001589601 N
TsM_000155300 Taenia solium TsM_000155300 N
WUBG_11438 Wuchereria bancrofti WUBG_11438 N