CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_5980021
(
Branchiostoma floridae
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
estExt_gwp.C_5980021
T159489_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_5980021
C2HC ZF
43
71
VCPTPGCDGSGHANGSFLTHRSLSGCPRA
Links
Other
C2HC ZF
family TFs
Other
Branchiostoma floridae
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22011176m.g
Octopus bimaculoides
Ocbimv22011176m.g
N
0.966
MYT1L
Homo sapiens
ENSG00000186487
I
0.897
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
0.897
HelroG177982
Helobdella robusta
HelroG177982
N
0.897
AMEM007577
Anopheles merus
AMEM007577
N
0.793
WUBG_11438
Wuchereria bancrofti
WUBG_11438
N
0.724
Bm4268
Brugia malayi
Bm4268
N
0.724
ANCDUO_13707
Ancylostoma duodenale
ANCDUO_13707
N
0.724
EEL_0000200601
Elaeophora elaphi
EEL_0000200601
N
0.724
HPBE_0001834901
Heligmosomoides bakeri
HPBE_0001834901
N
0.724
L892_g7301
Steinernema scapterisci
L892_g7301
N
0.724
L898_g12863
Steinernema monticolum
L898_g12863
N
0.724
maker-nMf.1.1.scaf02509-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf02509-snap-gene-0.6
N
0.724
nAv.1.0.1.g04361
Acanthocheilonema viteae
nAv.1.0.1.g04361
N
0.724
nOo.2.0.1.g09682
Onchocerca ochengi
nOo.2.0.1.g09682
N
0.724
PXEA_0003323301
Protopolystoma xenopodis
PXEA_0003323301
N
0.724
SPER_0003596801
Spirometra erinaceieuropaei
SPER_0003596801
N
0.724
TsM_000155300
Taenia solium
TsM_000155300
N
0.724