CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra037417
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra037417
T018943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra037417.1-P
B3
21
120
FDKVLTTSDVGKLNRLVIPKQHAENYFPLEEIENGTMLEFQDRNGKMWKFRYLYWSSSQSYVMTKGWVRFVKDKNLESGDTISFHRSYVPDDTEPGKRIK
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00853s090
Brassica oleracea
Bo00853s090
I
0.742
Bo9g004050
Brassica oleracea
Bo9g004050
N
0.918
Bostr.7365s0004
Boechera stricta
Bostr.7365s0004
I
0.747
Bra008552
Brassica rapa
Bra008552
I
0.753
Cagra.23502s0003
Capsella grandiflora
Cagra.23502s0003
I
0.711
Carubv10001406m.g
Capsella rubella
Carubv10001406m.g
I
0.711
NGA4
Arabidopsis lyrata
scaffold_604140.1
I
0.742
Thhalv10028783m.g
Eutrema salsugineum
Thhalv10028783m.g
I
0.773
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.821