Carubv10019353m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10019353m.g T022883_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.960 0.960
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.960 0.960
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019353m B3 94 196

Links

Other B3 family TFs
Other Capsella rubella TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_204095 Agaricus bisporus AGABI2DRAFT_204095 N
BN946_scf184775.g25 Trametes cinnabarina BN946_scf184775.g25 I
CC1G_14187 Coprinopsis cinerea CC1G_14187 I
CERSUDRAFT_123724 Ceriporiopsis subvermispora CERSUDRAFT_123724 I
CY34DRAFT_802483 Suillus luteus CY34DRAFT_802483 I
EuGene3000845 Heterobasidion annosum EuGene3000845 I
FIBRA_03533 Fibroporia radiculosa FIBRA_03533 I
FOMPIDRAFT_38053 Fomitopsis pinicola FOMPIDRAFT_38053 N
GALMADRAFT_249199 Galerina marginata GALMADRAFT_249199 I
GLOTRDRAFT_21049 Gloeophyllum trabeum GLOTRDRAFT_21049 I
HETIRDRAFT_248323 Heterobasidion irregulare HETIRDRAFT_248323 I
JAAARDRAFT_97104 Jaapia argillacea JAAARDRAFT_97104 I
K443DRAFT_671198 Laccaria amethystina K443DRAFT_671198 I
LACBIDRAFT_313819 Laccaria bicolor LACBIDRAFT_313819 I
M413DRAFT_441939 Hebeloma cylindrosporum M413DRAFT_441939 I
Moror_6823 Moniliophthora roreri Moror_6823 I
PAXRUDRAFT_62501 Paxillus rubicundulus PAXRUDRAFT_62501 I
PHLGIDRAFT_21983 Phlebiopsis gigantea PHLGIDRAFT_21983 I
PILCRDRAFT_809854 Piloderma croceum PILCRDRAFT_809854 I
PLEOSDRAFT_1027210 Pleurotus ostreatus PLEOSDRAFT_1027210 I
SCHCODRAFT_110420 Schizophyllum commune SCHCODRAFT_110420 D
SCLCIDRAFT_13268 Scleroderma citrinum SCLCIDRAFT_13268 I