CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HETIRDRAFT_248323
(
Heterobasidion irregulare
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HETIRDRAFT_248323
T119385_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.802
0.907
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETW80832
C2H2 ZF
4
26
YACDMCALSFNRQHDLKRHRETH
ETW80832
C2H2 ZF
32
52
FLCNGGCGKTFTRKDALKRHQ
Links
Other
C2H2 ZF
family TFs
Other
Heterobasidion irregulare
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_452363
Amanita muscaria
M378DRAFT_452363
I
0.808
EuGene3000845
Heterobasidion annosum
EuGene3000845
I
0.808
PLEOSDRAFT_1027210
Pleurotus ostreatus
PLEOSDRAFT_1027210
I
0.803
CC1G_14187
Coprinopsis cinerea
CC1G_14187
I
0.802
M413DRAFT_441939
Hebeloma cylindrosporum
M413DRAFT_441939
I
0.802
SCHCODRAFT_110420
Schizophyllum commune
SCHCODRAFT_110420
D
0.802
PAXRUDRAFT_62501
Paxillus rubicundulus
PAXRUDRAFT_62501
I
0.797
GLOTRDRAFT_21049
Gloeophyllum trabeum
GLOTRDRAFT_21049
I
0.793
JAAARDRAFT_97104
Jaapia argillacea
JAAARDRAFT_97104
I
0.793
PILCRDRAFT_809854
Piloderma croceum
PILCRDRAFT_809854
I
0.784
GALMADRAFT_249199
Galerina marginata
GALMADRAFT_249199
I
0.778
CERSUDRAFT_123724
Ceriporiopsis subvermispora
CERSUDRAFT_123724
I
0.774
CY34DRAFT_802483
Suillus luteus
CY34DRAFT_802483
I
0.774
PHLGIDRAFT_21983
Phlebiopsis gigantea
PHLGIDRAFT_21983
I
0.774
M404DRAFT_75055
Pisolithus tinctorius
M404DRAFT_75055
N
0.773
PISMIDRAFT_84092
Pisolithus microcarpus
PISMIDRAFT_84092
N
0.773
BN946_scf184775.g25
Trametes cinnabarina
BN946_scf184775.g25
I
0.769
POSPLDRAFT_38779
Postia placenta
POSPLDRAFT_38779
N
0.769
AGABI2DRAFT_204095
Agaricus bisporus
AGABI2DRAFT_204095
N
0.763