CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E01093
(
Eucalyptus grandis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Eucgr.E01093
T023013_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E01093.1
B3
33
138
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTSDKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGAGESGKDRLYIDWRRRP
Links
Other
B3
family TFs
Other
Eucalyptus grandis
TFs
284 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA024146
Oryza indica
BGIOSGA024146
N
OB07G23510
Oryza brachyantha
OB07G23510
N
OBART07G17630
Oryza barthii
OBART07G17630
N
OGLUM07G17270
Oryza glumaepatula
OGLUM07G17270
N
OLONG_014592
Oryza longistaminata
OLONG_014592
N
OMERI07G14510
Oryza meridionalis
OMERI07G14510
N
ONIVA07G15940
Oryza nivara
ONIVA07G15940
N
OPUNC07G16420
Oryza punctata
OPUNC07G16420
N
ORGLA07G0141300
Oryza glaberrima
ORGLA07G0141300
N
ORUFI07G18300
Oryza rufipogon
ORUFI07G18300
N
OS07G0543000
Oryza sativa
OS07G0543000
N
Pavir.Ba00731
Panicum virgatum
Pavir.Ba00731
N
Pavir.J35704
Panicum virgatum
Pavir.J35704
N
PGSC0003DMG400021717
Solanum tuberosum
PGSC0003DMG400021717
N
Sb02g035580
Sorghum bicolor
Sb02g035580
N
Si030877m.g
Setaria italica
Si030877m.g
N
Solyc02g079970.2
Solanum lycopersicum
Solyc02g079970.2
N