CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400021717
(
Solanum tuberosum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
PGSC0003DMG400021717
T043488_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400055906
bHLH
60
96
SKKRFQELSSILEPGKQPKMDKSVILGDAVRMVVQLR
PGSC0003DMT400055907
bHLH
71
121
SDSKAHREKMRRDKLNDRFQELSSILEPGKQPKMDKSVILGDAVRMVVQLR
Links
Other
bHLH
family TFs
Other
Solanum tuberosum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc02g079970.2
Solanum lycopersicum
Solyc02g079970.2
N
0.914
29842.m003681
Ricinus communis
29842.m003681
N
0.875
BGIOSGA024146
Oryza indica
BGIOSGA024146
N
0.856
OB07G23510
Oryza brachyantha
OB07G23510
N
0.856
OBART07G17630
Oryza barthii
OBART07G17630
N
0.856
OGLUM07G17270
Oryza glumaepatula
OGLUM07G17270
N
0.856
OLONG_014592
Oryza longistaminata
OLONG_014592
N
0.856
OMERI07G14510
Oryza meridionalis
OMERI07G14510
N
0.856
ONIVA07G15940
Oryza nivara
ONIVA07G15940
N
0.856
ORUFI07G18300
Oryza rufipogon
ORUFI07G18300
N
0.856
OS07G0543000
Oryza sativa
OS07G0543000
N
0.856
Sb02g035580
Sorghum bicolor
Sb02g035580
N
0.856
Si030877m.g
Setaria italica
Si030877m.g
N
0.856
Pavir.Ba00731
Panicum virgatum
Pavir.Ba00731
N
0.856
Pavir.J35704
Panicum virgatum
Pavir.J35704
N
0.856
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.844
Cla019717
Citrullus lanatus
Cla019717
N
0.843