Gorai.013G039800 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.013G039800 T023422_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.729 0.729
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G039800.1 B3 131 226
Gorai.013G039800.2 B3 131 226
Gorai.013G039800.3 B3 103 198
Gorai.013G039800.4 B3 89 184
Gorai.013G039800.5 B3 131 226
Gorai.013G039800.6 B3 89 184

Links

Other B3 family TFs
Other Gossypium raimondii TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP13085 Atta cephalotes ACEP13085 I 0.000
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.000
CapteG76255 Capitella teleta CapteG76255 I 0.000
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.000
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.000
CLEC007039 Cimex lectularius CLEC007039 I 0.000
snai2 Danio rerio ENSDARG00000040046 I 0.000
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.000
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I 0.000
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I 0.000
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I 0.000
snai2 Oryzias latipes ENSORLG00000017475 I 0.000
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I 0.000
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I 0.000
snai2 Takifugu rubripes ENSTRUG00000006860 I 0.000
ENSXMAG00000019030 Xiphophorus maculatus ENSXMAG00000019030 I 0.000
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.000
esg Drosophila melanogaster FBgn0001981 D 0.000
wor Drosophila melanogaster FBgn0001983 D 0.000
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.000
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.000
GF14525 Drosophila ananassae FBgn0091552 I 0.000
GF15382 Drosophila ananassae FBgn0092407 I 0.000
GG24207 Drosophila erecta FBgn0116339 I 0.000
GG25158 Drosophila erecta FBgn0117283 I 0.000
GH13119 Drosophila grimshawi FBgn0120596 I 0.000
GH13754 Drosophila grimshawi FBgn0121230 I 0.000
GI17894 Drosophila mojavensis FBgn0140635 I 0.000
GI22651 Drosophila mojavensis FBgn0145379 I 0.000
GL26425 Drosophila persimilis FBgn0164007 I 0.000
GL26594 Drosophila persimilis FBgn0164176 I 0.000
GD21956 Drosophila simulans FBgn0193371 I 0.000
GD24004 Drosophila simulans FBgn0195364 I 0.000
GJ17399 Drosophila virilis FBgn0204571 I 0.000
GJ23203 Drosophila virilis FBgn0210305 I 0.000
GK18133 Drosophila willistoni FBgn0220132 I 0.000
GK18253 Drosophila willistoni FBgn0220252 I 0.000
GE19402 Drosophila yakuba FBgn0236745 I 0.000
GE20968 Drosophila yakuba FBgn0238253 I 0.000
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.000
HMEL002306 Heliconius melpomene HMEL002306 I 0.000
KGM_17970 Danaus plexippus KGM_17970 I 0.000
L798_10614 Zootermopsis nevadensis L798_10614 I 0.000
LCUP006862 Lucilia cuprina LCUP006862 I 0.000
LCUP013268 Lucilia cuprina LCUP013268 I 0.000
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.000
LotgiG114290 Lottia gigantea LotgiG114290 I 0.000
MCINX001355 Melitaea cinxia MCINX001355 I 0.000
MDOA006149 Musca domestica MDOA006149 I 0.000
MDOA014024 Musca domestica MDOA014024 I 0.000
NV17743 Nasonia vitripennis NV17743 I 0.000
PHUM091060 Pediculus humanus PHUM091060 I 0.000
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.000
RPRC005707 Rhodnius prolixus RPRC005707 I 0.000
SINV14155 Solenopsis invicta SINV14155 I 0.000
SMAR001314 Strigamia maritima SMAR001314 I 0.000
SMAR001730 Strigamia maritima SMAR001730 I 0.000
TC014474 Tribolium castaneum TC014474 I 0.000
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.000