Pavir.Da02442 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Da02442 T023820_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da02442.1.p B3 35 140

Links

Other B3 family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022089 Oryza indica BGIOSGA022089 N 0.835
BGIOSGA022090 Oryza indica BGIOSGA022090 N 0.827
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.722
BRADI1G52000 Brachypodium distachyon BRADI1G52000 N 0.745
BRADI3G16500 Brachypodium distachyon BRADI3G16500 N 0.714
GRMZM2G027253 Zea mays GRMZM2G027253 N 0.835
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.701
GRMZM2G405170 Zea mays GRMZM2G405170 N 0.742
LPERR06G00460 Leersia perrieri LPERR06G00460 N 0.796
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.711
MLOC_19134 Hordeum vulgare MLOC_19134 N 0.784
OB06G10550 Oryza brachyantha OB06G10550 N 0.804
OBART03G25130 Oryza barthii OBART03G25130 N 0.835
OBART10G17010 Oryza barthii OBART10G17010 N 0.722
OGLUM06G00440 Oryza glumaepatula OGLUM06G00440 N 0.835
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.722
OMERI06G00450 Oryza meridionalis OMERI06G00450 N 0.825
ONIVA06G00500 Oryza nivara ONIVA06G00500 N 0.827
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.722
OPUNC06G00440 Oryza punctata OPUNC06G00440 N 0.835
OPUNC08G03290 Oryza punctata OPUNC08G03290 N 0.716
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.722
ORGLA06G0005000 Oryza glaberrima ORGLA06G0005000 N 0.835
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.722
ORUFI06G00530 Oryza rufipogon ORUFI06G00530 N 0.835
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.722
OS10G0537100 Oryza sativa OS10G0537100 N 0.722
Pavir.Db02478 Panicum virgatum Pavir.Db02478 N 0.939
Sb10g000780 Sorghum bicolor Sb10g000780 N 0.827
Si008509m.g Setaria italica Si008509m.g N 0.938
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N 0.755