Pavir.Db02478 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Db02478 T023826_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db02478.1.p B3 43 146

Links

Other B3 family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Da02442 Panicum virgatum Pavir.Da02442 N 0.939
Si008509m.g Setaria italica Si008509m.g N 0.908
BGIOSGA022089 Oryza indica BGIOSGA022089 N 0.827
BGIOSGA022090 Oryza indica BGIOSGA022090 N 0.827
OBART03G25130 Oryza barthii OBART03G25130 N 0.827
OGLUM06G00440 Oryza glumaepatula OGLUM06G00440 N 0.827
ONIVA06G00500 Oryza nivara ONIVA06G00500 N 0.827
OPUNC06G00440 Oryza punctata OPUNC06G00440 N 0.827
ORGLA06G0005000 Oryza glaberrima ORGLA06G0005000 N 0.827
ORUFI06G00530 Oryza rufipogon ORUFI06G00530 N 0.827
GRMZM2G027253 Zea mays GRMZM2G027253 N 0.816
OMERI06G00450 Oryza meridionalis OMERI06G00450 N 0.816
Sb10g000780 Sorghum bicolor Sb10g000780 N 0.806
LPERR06G00460 Leersia perrieri LPERR06G00460 N 0.796
OB06G10550 Oryza brachyantha OB06G10550 N 0.796
MLOC_19134 Hordeum vulgare MLOC_19134 N 0.765
BRADI1G52000 Brachypodium distachyon BRADI1G52000 N 0.745
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N 0.745
GRMZM2G405170 Zea mays GRMZM2G405170 N 0.735
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.724
OBART10G17010 Oryza barthii OBART10G17010 N 0.724
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.724
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.724
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.724
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.724
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.724
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.724
OS10G0537100 Oryza sativa OS10G0537100 N 0.724
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.714
Si039972m.g Setaria italica Si039972m.g N 0.704