CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J27608
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J27608
T023981_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J27608.1.p
B3
92
189
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGEAARDRR
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
281 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009653
Calypte anna
Aan_R009653
I
Afo_R011420
Aptenodytes forsteri
Afo_R011420
I
Alligator_sinensis_CCG008426.1
Alligator sinensis
Alligator_sinensis_CCG008426.1
I
A_04922
Schistosoma haematobium
A_04922
I
Cmyd_10016714
Chelonia mydas
Cmyd_10016714
I
csin100553
Clonorchis sinensis
csin100553
I
ECPE_0000416201
Echinostoma caproni
ECPE_0000416201
I
ENSAPLG00000010851
Anas platyrhynchos
ENSAPLG00000010851
I
ENSFALG00000006654
Ficedula albicollis
ENSFALG00000006654
I
ENSGALG00000005728
Gallus gallus
ENSGALG00000005728
I
FOXF2
Ornithorhynchus anatinus
ENSOANG00000015736
I
foxf2a
Oryzias latipes
ENSORLG00000017250
I
foxf2a
Tetraodon nigroviridis
ENSTNIG00000008527
I
foxf2a
Takifugu rubripes
ENSTRUG00000011537
I
Gfo_R000500
Geospiza fortis
Gfo_R000500
I
Gfo_R003355
Geospiza fortis
Gfo_R003355
I
MCOS_0000840801
Mesocestoides corti
MCOS_0000840801
I
PTRK_0001370600
Parastrongyloides trichosuri
PTRK_0001370600
I
Pvit_16864
Pogona vitticeps
Pvit_16864
I
Sjc_0067660
Schistosoma japonicum
Sjc_0067660
I
Smp_076300
Schistosoma mansoni
Smp_076300
I
T265_04564
Opisthorchis viverrini
T265_04564
I