CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK21157.1
(
Cannabis sativa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
PK21157.1
T024361_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK21157.1
B3
49
159
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDNSSTTEDSSKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGDESAKARLYIDWRRRP
Links
Other
B3
family TFs
Other
Cannabis sativa
TFs
244 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_78141
Agaricus bisporus
AGABI2DRAFT_78141
N
DICSQDRAFT_137077
Dichomitus squalens
DICSQDRAFT_137077
N
GALMADRAFT_158573
Galerina marginata
GALMADRAFT_158573
N
gw1.9.705.1
Heterobasidion annosum
gw1.9.705.1
N
HETIRDRAFT_239108
Heterobasidion irregulare
HETIRDRAFT_239108
N
Moror_3852
Moniliophthora roreri
Moror_3852
N
PISMIDRAFT_116994
Pisolithus microcarpus
PISMIDRAFT_116994
N
PLICRDRAFT_45561
Plicaturopsis crispa
PLICRDRAFT_45561
N
SERLA73DRAFT_184144
Serpula lacrymans
SERLA73DRAFT_184144
N