PK21157.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK21157.1 T024361_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK21157.1 B3 49 159

Links

Other B3 family TFs
Other Cannabis sativa TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.929
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.911
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.891
30068.m002615 Ricinus communis 30068.m002615 I 0.891
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.891
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.891
TCM_005014 Theobroma cacao TCM_005014 I 0.881
30076.m004471 Ricinus communis 30076.m004471 I 0.881
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.881
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.881
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.881
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.881
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.871
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.871
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.871
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.871
Pm024248 Prunus mume Pm024248 I 0.871
Pm028725 Prunus mume Pm028725 N 0.871
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.871
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.871
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.871
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.871
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.871
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.871
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.865
NGA2 Arabidopsis thaliana AT3G61970 N 0.861
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.861
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.861
TCM_015590 Theobroma cacao TCM_015590 I 0.861
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.861
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.861
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.861
PK11025.1 Cannabis sativa PK11025.1 I 0.861
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.861
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.857
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.851
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.851
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.851
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.851
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.851
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.851
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.851
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.851
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.851
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.851
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.851
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.851
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.851
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.842
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.842
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.842
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.842
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.842
Cla005055 Citrullus lanatus Cla005055 N 0.842
Cla006845 Citrullus lanatus Cla006845 I 0.842
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.842
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.842
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.842
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.842
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.842
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.842
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.842
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.842
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.842
NGA1 Arabidopsis thaliana AT2G46870 N 0.832
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.832
Bo3g039420 Brassica oleracea Bo3g039420 N 0.832
Bra000434 Brassica rapa Bra000434 N 0.832
Bra003482 Brassica rapa Bra003482 N 0.832
Bra004501 Brassica rapa Bra004501 N 0.832
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.832
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.832
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.832
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.832
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.832
OB03G11610 Oryza brachyantha OB03G11610 N 0.832
OBART03G01650 Oryza barthii OBART03G01650 N 0.832
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.832
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.832
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.832
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.832
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.832
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.832
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.832
OS03G0120900 Oryza sativa OS03G0120900 N 0.832
Si036864m.g Setaria italica Si036864m.g N 0.832
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.832
Ca_01368 Cicer arietinum Ca_01368 I 0.832
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.832
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.832
NGA3 Arabidopsis thaliana AT1G01030 N 0.822
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.822
Bo3g001110 Brassica oleracea Bo3g001110 N 0.822
Bo4g006900 Brassica oleracea Bo4g006900 N 0.822
Bo5g002790 Brassica oleracea Bo5g002790 N 0.822
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.822
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.822
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.822
OBART02G28100 Oryza barthii OBART02G28100 N 0.822
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.822
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.822
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.822
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.822
OS02G0683500 Oryza sativa OS02G0683500 N 0.822
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.822
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.822
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.822
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.822
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.822
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.822
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.822
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.822
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.820
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.820
Bo6g079210 Brassica oleracea Bo6g079210 N 0.812
Bo8g097490 Brassica oleracea Bo8g097490 N 0.812
Bra007646 Brassica rapa Bra007646 N 0.812
Bra030497 Brassica rapa Bra030497 N 0.812
Bra040478 Brassica rapa Bra040478 I 0.812
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.812
OB02G35380 Oryza brachyantha OB02G35380 I 0.812
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.812
mgf023769m Mimulus guttatus mgf023769m N 0.812
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.812
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.812
Bo4g197410 Brassica oleracea Bo4g197410 I 0.802
Bra014415 Brassica rapa Bra014415 N 0.802
Bra033294 Brassica rapa Bra033294 N 0.802
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.802
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.802
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.802
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.802
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.802
OBART04G22880 Oryza barthii OBART04G22880 I 0.802
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.802
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.802
OS04G0581400 Oryza sativa OS04G0581400 I 0.802
Si011823m.g Setaria italica Si011823m.g N 0.802
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.802
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.802
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.802
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.802
Cla014858 Citrullus lanatus Cla014858 N 0.798
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.798
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.792
Bo4g099000 Brassica oleracea Bo4g099000 N 0.792
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.792
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.792
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.792
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.792
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.789
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.782
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.782
MDP0000138163 Malus domestica MDP0000138163 N 0.782
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.773
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.772
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.772
OBART10G17010 Oryza barthii OBART10G17010 N 0.772
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.772
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.772
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.772
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.772
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.772
OS10G0537100 Oryza sativa OS10G0537100 N 0.772
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.772
Si020241m.g Setaria italica Si020241m.g N 0.772
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.772
MDP0000288808 Malus domestica MDP0000288808 N 0.772
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.772
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.772
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.762
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.762
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.759
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.758
OB10G24100 Oryza brachyantha OB10G24100 N 0.756
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.753
Si039972m.g Setaria italica Si039972m.g N 0.752
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.752
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.747
TCM_022729 Theobroma cacao TCM_022729 N 0.747
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.745
MDP0000128295 Malus domestica MDP0000128295 N 0.745
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.743
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.743
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.743
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.743
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.743
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.743
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.737
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.737
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.736
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.733
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.728
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.725
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.725
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.725
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.724
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.724
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.723
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.723
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.723
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.723
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.723
Ca_25633 Cicer arietinum Ca_25633 I 0.723
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.723
mgf023686m Mimulus guttatus mgf023686m I 0.723
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.723
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.723
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.723
MDP0000229742 Malus domestica MDP0000229742 N 0.723
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.723
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.723
PK04952.1 Cannabis sativa PK04952.1 I 0.723
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.722
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.717
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.714
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.713
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.713
Cla017937 Citrullus lanatus Cla017937 I 0.713
30032.m000462 Ricinus communis 30032.m000462 N 0.713
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.713
mgf019085m Mimulus guttatus mgf019085m N 0.713
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.713
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.713
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.713
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.713
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.713
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.713
OB01G36520 Oryza brachyantha OB01G36520 I 0.711
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.707
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N 0.706
Bo3g064320 Brassica oleracea Bo3g064320 N 0.703
F775_04153 Aegilops tauschii F775_04153 N 0.703
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.703
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.703
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.703
OB05G32250 Oryza brachyantha OB05G32250 I 0.703
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.703
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.703
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.703
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.703
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.703
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.703
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.703