MDP0000229742 (Malus domestica)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 MDP0000229742 T023634_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000229742 B3 106 207

Links

Other B3 family TFs
Other Malus domestica TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.909
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.893
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.861
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.851
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.851
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.848
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.848
PK04952.1 Cannabis sativa PK04952.1 I 0.842
TCM_022729 Theobroma cacao TCM_022729 N 0.838
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.832
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.832
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.832
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.832
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.832
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.822
Ca_25633 Cicer arietinum Ca_25633 I 0.822
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.822
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.822
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.822
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.812
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.812
Cla017937 Citrullus lanatus Cla017937 I 0.812
30032.m000462 Ricinus communis 30032.m000462 N 0.812
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.812
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.812
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.808
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.802
OB12G13420 Oryza brachyantha OB12G13420 N 0.802
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.802
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.802
Ca_00826 Cicer arietinum Ca_00826 N 0.802
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.802
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.802
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.802
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.802
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.802
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.802
Bo5g136360 Brassica oleracea Bo5g136360 N 0.792
Bra017262 Brassica rapa Bra017262 N 0.792
Bra034828 Brassica rapa Bra034828 N 0.792
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.792
mgf019085m Mimulus guttatus mgf019085m N 0.792
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.792
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.792
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.792
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.792
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.792
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.788
F775_31255 Aegilops tauschii F775_31255 N 0.785
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.784
ARF31 Arabidopsis thaliana AT2G36080 N 0.782
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.782
Bo01079s020 Brassica oleracea Bo01079s020 N 0.782
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.782
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.782
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.782
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.782
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.782
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.782
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.772
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.772
Bo3g064320 Brassica oleracea Bo3g064320 N 0.772
Bo4g035110 Brassica oleracea Bo4g035110 N 0.772
Bra005301 Brassica rapa Bra005301 N 0.772
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.772
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.772
OBART11G03590 Oryza barthii OBART11G03590 N 0.772
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.772
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.772
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.772
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.772
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.772
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.772
OS11G0156000 Oryza sativa OS11G0156000 N 0.772
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.772
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.772
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.772
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.772
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.772
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.772
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.772
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.772
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.772
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.772
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.772
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.771
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.768
Bo3g003800 Brassica oleracea Bo3g003800 N 0.762
Bra001411 Brassica rapa Bra001411 N 0.762
Bra005886 Brassica rapa Bra005886 N 0.762
OB11G12920 Oryza brachyantha OB11G12920 N 0.762
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.762
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.762
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.762
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.760
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.758
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.752
Bo9g176470 Brassica oleracea Bo9g176470 N 0.752
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.752
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.752
F775_02500 Aegilops tauschii F775_02500 N 0.752
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.752
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.752
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.752
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.752
OBART12G03490 Oryza barthii OBART12G03490 N 0.752
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.752
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.752
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.752
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.752
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.752
Si027632m.g Setaria italica Si027632m.g N 0.752
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.752
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.752
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.752
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.752
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.752
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.752
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.752
mgf018965m Mimulus guttatus mgf018965m N 0.747
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.743
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.743
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.743
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.743
Si010849m.g Setaria italica Si010849m.g N 0.743
Pm028725 Prunus mume Pm028725 N 0.743
30068.m002615 Ricinus communis 30068.m002615 I 0.743
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.743
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.743
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.743
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.743
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.735
Cla005055 Citrullus lanatus Cla005055 N 0.735
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.733
Bra041023 Brassica rapa Bra041023 N 0.733
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.733
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.733
OBART10G17010 Oryza barthii OBART10G17010 N 0.733
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.733
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.733
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.733
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.733
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.733
OS10G0537100 Oryza sativa OS10G0537100 N 0.733
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.733
Si020241m.g Setaria italica Si020241m.g N 0.733
Cla006845 Citrullus lanatus Cla006845 I 0.733
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.733
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.733
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.733
OB10G24100 Oryza brachyantha OB10G24100 N 0.731
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.727
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.723
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.723
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.723
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.723
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.723
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.723
OB03G11610 Oryza brachyantha OB03G11610 N 0.723
OBART03G01650 Oryza barthii OBART03G01650 N 0.723
OBART04G22880 Oryza barthii OBART04G22880 I 0.723
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.723
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.723
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.723
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.723
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.723
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.723
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.723
OS03G0120900 Oryza sativa OS03G0120900 N 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.723
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.723
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.723
Si011823m.g Setaria italica Si011823m.g N 0.723
Si036864m.g Setaria italica Si036864m.g N 0.723
Si039972m.g Setaria italica Si039972m.g N 0.723
TCM_005014 Theobroma cacao TCM_005014 I 0.723
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.723
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.723
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.723
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.723
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.723
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.723
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.723
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.723
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.723
PK21157.1 Cannabis sativa PK21157.1 I 0.723
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.722
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.714
NGA2 Arabidopsis thaliana AT3G61970 N 0.713
Bra003482 Brassica rapa Bra003482 N 0.713
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.713
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.713
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.713
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.713
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
Pm024248 Prunus mume Pm024248 I 0.713
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.713
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.713
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.713
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.713
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.713
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.713
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.713
PK11025.1 Cannabis sativa PK11025.1 I 0.713
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N 0.706
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.705
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.703
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.703
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.703
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.703
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.703
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.703
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.703
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.703
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.703
TCM_015590 Theobroma cacao TCM_015590 I 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.703
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.703
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.703
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.703
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.703
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.703
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.703
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.703
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.700
Bra040478 Brassica rapa Bra040478 I 0.700