Gorai.006G152400 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.006G152400 T023340_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G152400.1 B3 40 143

Links

Other B3 family TFs
Other Gossypium raimondii TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.911
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.901
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.881
TCM_022729 Theobroma cacao TCM_022729 N 0.881
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.881
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.881
ARF31 Arabidopsis thaliana AT2G36080 N 0.871
Bo4g035110 Brassica oleracea Bo4g035110 N 0.871
Bra005301 Brassica rapa Bra005301 N 0.871
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.871
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.871
Bo01079s020 Brassica oleracea Bo01079s020 N 0.861
Bra017262 Brassica rapa Bra017262 N 0.861
30032.m000462 Ricinus communis 30032.m000462 N 0.861
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.861
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.861
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.861
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.861
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.851
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.851
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.842
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.842
Cla017937 Citrullus lanatus Cla017937 I 0.842
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.842
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.842
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.842
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.842
OB12G13420 Oryza brachyantha OB12G13420 N 0.832
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.832
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.832
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.832
PK04952.1 Cannabis sativa PK04952.1 I 0.832
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.822
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.822
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.822
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.812
OBART11G03590 Oryza barthii OBART11G03590 N 0.812
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.812
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.812
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.812
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.812
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.812
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.812
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.812
OS11G0156000 Oryza sativa OS11G0156000 N 0.812
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.812
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.812
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.802
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.802
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.802
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.802
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.802
OB11G12920 Oryza brachyantha OB11G12920 N 0.802
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.802
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.802
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.802
Si027632m.g Setaria italica Si027632m.g N 0.802
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.802
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.802
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.802
Ca_25633 Cicer arietinum Ca_25633 I 0.802
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.802
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.798
Bo3g064320 Brassica oleracea Bo3g064320 N 0.792
Bo9g176470 Brassica oleracea Bo9g176470 N 0.792
Bra001411 Brassica rapa Bra001411 N 0.792
Bra034828 Brassica rapa Bra034828 N 0.792
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.792
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.792
Ca_00826 Cicer arietinum Ca_00826 N 0.792
mgf019085m Mimulus guttatus mgf019085m N 0.792
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.792
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.792
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.792
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.792
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.792
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.782
Bo3g003800 Brassica oleracea Bo3g003800 N 0.782
Bo5g136360 Brassica oleracea Bo5g136360 N 0.782
Bra005886 Brassica rapa Bra005886 N 0.782
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.782
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.782
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.782
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.782
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.782
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.782
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.782
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.782
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.782
MDP0000229742 Malus domestica MDP0000229742 N 0.782
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.782
F775_02500 Aegilops tauschii F775_02500 N 0.772
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.772
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.772
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.772
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.772
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.772
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.772
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.772
Bra041023 Brassica rapa Bra041023 N 0.762
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.762
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.752
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.752
mgf018965m Mimulus guttatus mgf018965m N 0.752
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.743
OBART12G03490 Oryza barthii OBART12G03490 N 0.743
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.743
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.743
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.743
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.743
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.743
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.733
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.733
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.723
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.723
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.723
OBART03G01650 Oryza barthii OBART03G01650 N 0.723
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.723
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.723
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.723
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.723
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.723
OS03G0120900 Oryza sativa OS03G0120900 N 0.723
TCM_005014 Theobroma cacao TCM_005014 I 0.723
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.723
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.713
F775_31255 Aegilops tauschii F775_31255 N 0.713
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.713
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.713
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.713
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.713
OB03G11610 Oryza brachyantha OB03G11610 N 0.713
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.713
Si011823m.g Setaria italica Si011823m.g N 0.713
Si036864m.g Setaria italica Si036864m.g N 0.713
Si039972m.g Setaria italica Si039972m.g N 0.713
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.713
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.713
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.713
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.713
Pm024248 Prunus mume Pm024248 I 0.713
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.713
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.713
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.713
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.713
PK11025.1 Cannabis sativa PK11025.1 I 0.713
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.703
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.703
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.703
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.703
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.703
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
OBART04G22880 Oryza barthii OBART04G22880 I 0.703
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.703
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.703
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.703
OS04G0581400 Oryza sativa OS04G0581400 I 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.703
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.703
Si010849m.g Setaria italica Si010849m.g N 0.703
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.703
TCM_015590 Theobroma cacao TCM_015590 I 0.703
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.703
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.703
Cla014858 Citrullus lanatus Cla014858 N 0.703
30076.m004471 Ricinus communis 30076.m004471 I 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.703
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.703
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.703
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.703
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.703
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.703
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.703
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.703
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.703
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.700