Gorai.009G399000 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.009G399000 T023379_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G399000.1 B3 84 187
Gorai.009G399000.2 B3 84 187
Gorai.009G399000.3 B3 84 187

Links

Other B3 family TFs
Other Gossypium raimondii TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_022729 Theobroma cacao TCM_022729 N 0.949
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.941
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.921
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.921
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.921
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.921
30032.m000462 Ricinus communis 30032.m000462 N 0.911
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.911
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.911
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.909
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.909
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.901
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.881
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.881
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.881
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.881
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.871
Cla017937 Citrullus lanatus Cla017937 I 0.871
PK04952.1 Cannabis sativa PK04952.1 I 0.871
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.869
Bo4g035110 Brassica oleracea Bo4g035110 N 0.861
Bra005301 Brassica rapa Bra005301 N 0.861
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.861
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.861
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.861
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.861
Bo01079s020 Brassica oleracea Bo01079s020 N 0.851
Bra017262 Brassica rapa Bra017262 N 0.851
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.851
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.851
Ca_25633 Cicer arietinum Ca_25633 I 0.851
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.843
ARF31 Arabidopsis thaliana AT2G36080 N 0.842
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.842
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.842
OB12G13420 Oryza brachyantha OB12G13420 N 0.842
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.842
mgf019085m Mimulus guttatus mgf019085m N 0.842
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.842
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.842
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.842
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.842
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.832
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.832
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.832
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.832
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.832
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.832
Si027632m.g Setaria italica Si027632m.g N 0.832
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.832
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.832
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.832
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.832
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.832
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.832
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.832
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.832
Bo3g003800 Brassica oleracea Bo3g003800 N 0.822
Bo5g136360 Brassica oleracea Bo5g136360 N 0.822
Bo9g176470 Brassica oleracea Bo9g176470 N 0.822
Bra001411 Brassica rapa Bra001411 N 0.822
Bra005886 Brassica rapa Bra005886 N 0.822
Bra034828 Brassica rapa Bra034828 N 0.822
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.822
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.822
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.822
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.822
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.822
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.822
MDP0000229742 Malus domestica MDP0000229742 N 0.822
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.822
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.818
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.812
Bo3g064320 Brassica oleracea Bo3g064320 N 0.812
OBART11G03590 Oryza barthii OBART11G03590 N 0.812
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.812
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.812
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.812
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.812
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.812
OS11G0156000 Oryza sativa OS11G0156000 N 0.812
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.812
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.812
Ca_00826 Cicer arietinum Ca_00826 N 0.812
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.812
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.808
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.808
F775_02500 Aegilops tauschii F775_02500 N 0.802
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.802
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.802
OB11G12920 Oryza brachyantha OB11G12920 N 0.802
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.802
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.802
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.802
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.802
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.798
mgf018965m Mimulus guttatus mgf018965m N 0.798
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.792
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.792
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.792
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.792
Bra041023 Brassica rapa Bra041023 N 0.782
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.782
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.772
OBART12G03490 Oryza barthii OBART12G03490 N 0.772
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.772
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.772
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.772
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.772
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.772
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.771
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.770
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.762
TCM_005014 Theobroma cacao TCM_005014 I 0.762
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.755
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.752
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.752
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.752
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.752
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.752
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.752
Pm024248 Prunus mume Pm024248 I 0.752
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.752
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.752
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.752
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.752
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.752
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.752
PK11025.1 Cannabis sativa PK11025.1 I 0.752
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.747
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.743
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.743
OB03G11610 Oryza brachyantha OB03G11610 N 0.743
OBART03G01650 Oryza barthii OBART03G01650 N 0.743
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.743
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.743
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.743
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.743
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.743
OS03G0120900 Oryza sativa OS03G0120900 N 0.743
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.743
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.743
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.743
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.743
TCM_015590 Theobroma cacao TCM_015590 I 0.743
30068.m002615 Ricinus communis 30068.m002615 I 0.743
30076.m004471 Ricinus communis 30076.m004471 I 0.743
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.743
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.743
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.743
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.743
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.743
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.743
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
Cla014858 Citrullus lanatus Cla014858 N 0.737
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.733
Bra003482 Brassica rapa Bra003482 N 0.733
Bra040478 Brassica rapa Bra040478 I 0.733
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.733
F775_31255 Aegilops tauschii F775_31255 N 0.733
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.733
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.733
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.733
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.733
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.733
OBART04G22880 Oryza barthii OBART04G22880 I 0.733
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.733
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.733
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.733
OS04G0581400 Oryza sativa OS04G0581400 I 0.733
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.733
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.733
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.733
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.733
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.733
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.733
Si010849m.g Setaria italica Si010849m.g N 0.733
Si011823m.g Setaria italica Si011823m.g N 0.733
Si036864m.g Setaria italica Si036864m.g N 0.733
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.733
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.733
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.733
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.733
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.733
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.733
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.733
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.733
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.733
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.733
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
NGA2 Arabidopsis thaliana AT3G61970 N 0.723
Bo3g039420 Brassica oleracea Bo3g039420 N 0.723
Bo4g197410 Brassica oleracea Bo4g197410 I 0.723
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.723
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.723
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.723
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.723
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.723
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.723
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.723
Cla006845 Citrullus lanatus Cla006845 I 0.723
Pm028725 Prunus mume Pm028725 N 0.723
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.723
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.723
mgf023769m Mimulus guttatus mgf023769m N 0.723
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.723
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.723
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.723
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.723
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.723
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.723
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.723
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.723
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.723
PK21157.1 Cannabis sativa PK21157.1 I 0.723
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.720
NGA1 Arabidopsis thaliana AT2G46870 N 0.713
Bo6g079210 Brassica oleracea Bo6g079210 N 0.713
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.713
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.713
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.713
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.713
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.713
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.713
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.713
Si020241m.g Setaria italica Si020241m.g N 0.713
Si039972m.g Setaria italica Si039972m.g N 0.713
Ca_01368 Cicer arietinum Ca_01368 I 0.713
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.713
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.713
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.713
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.713
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.713
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.705
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.703
Bo4g006900 Brassica oleracea Bo4g006900 N 0.703
Bo8g097490 Brassica oleracea Bo8g097490 N 0.703
Bra000434 Brassica rapa Bra000434 N 0.703
Bra004501 Brassica rapa Bra004501 N 0.703
Bra007646 Brassica rapa Bra007646 N 0.703
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.703
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
OBART10G17010 Oryza barthii OBART10G17010 N 0.703
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.703
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.703
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.703
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.703
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.703
OS10G0537100 Oryza sativa OS10G0537100 N 0.703
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.703
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.703
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.703
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.703
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.703
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
MDP0000138163 Malus domestica MDP0000138163 N 0.703
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.703
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.701