Bra041023 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra041023 T018952_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra041023.1-P B3 32 143

Links

Other B3 family TFs
Other Brassica rapa TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.951
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.921
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.921
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.921
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.911
Bra001411 Brassica rapa Bra001411 N 0.911
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.911
Bo3g064320 Brassica oleracea Bo3g064320 N 0.901
Bra034828 Brassica rapa Bra034828 N 0.881
Bo5g136360 Brassica oleracea Bo5g136360 N 0.871
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.832
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.822
Bo9g176470 Brassica oleracea Bo9g176470 N 0.822
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.822
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.822
Bra005886 Brassica rapa Bra005886 N 0.822
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.822
Bo3g003800 Brassica oleracea Bo3g003800 N 0.812
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.812
ARF31 Arabidopsis thaliana AT2G36080 N 0.802
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.802
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.802
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.802
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.802
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.792
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.792
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.792
Ca_25633 Cicer arietinum Ca_25633 I 0.792
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.782
30032.m000462 Ricinus communis 30032.m000462 N 0.782
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.782
Bo4g035110 Brassica oleracea Bo4g035110 N 0.782
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.782
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.782
Bra005301 Brassica rapa Bra005301 N 0.782
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.782
Bo01079s020 Brassica oleracea Bo01079s020 N 0.782
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.782
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.782
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.782
Bra017262 Brassica rapa Bra017262 N 0.782
TCM_022729 Theobroma cacao TCM_022729 N 0.772
Ca_00826 Cicer arietinum Ca_00826 N 0.772
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.772
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.772
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.772
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.772
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.772
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.772
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.772
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.772
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.772
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.772
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.762
PK04952.1 Cannabis sativa PK04952.1 I 0.762
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.762
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.762
mgf019085m Mimulus guttatus mgf019085m N 0.752
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.752
Cla017937 Citrullus lanatus Cla017937 I 0.752
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.752
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.752
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.752
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.752
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.752
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.743
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.733
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.733
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.733
OB12G13420 Oryza brachyantha OB12G13420 N 0.733
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.733
MDP0000229742 Malus domestica MDP0000229742 N 0.733
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.723
F775_02500 Aegilops tauschii F775_02500 N 0.723
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.723
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.723
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.723
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.723
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.713
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.713
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.713
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.713
mgf018965m Mimulus guttatus mgf018965m N 0.713
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.707
PK11025.1 Cannabis sativa PK11025.1 I 0.703
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.703
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.703
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.703
Si027632m.g Setaria italica Si027632m.g N 0.703
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.703
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.703
OS11G0156000 Oryza sativa OS11G0156000 N 0.703
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.703
TCM_015590 Theobroma cacao TCM_015590 I 0.703
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.703
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.703
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.703
OBART11G03590 Oryza barthii OBART11G03590 N 0.703
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.703
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.703
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.703
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.701