Cucsa.241440 (Cucumis sativus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cucsa.241440 T022370_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.241440.1 B3 2 119

Links

Other B3 family TFs
Other Cucumis sativus TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla017937 Citrullus lanatus Cla017937 I 0.990
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.881
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.881
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.871
PK04952.1 Cannabis sativa PK04952.1 I 0.869
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.861
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.861
30032.m000462 Ricinus communis 30032.m000462 N 0.861
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.861
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.861
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.859
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.859
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.851
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.851
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.851
Ca_25633 Cicer arietinum Ca_25633 I 0.848
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.848
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.848
TCM_022729 Theobroma cacao TCM_022729 N 0.848
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.842
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.842
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.842
OB12G13420 Oryza brachyantha OB12G13420 N 0.832
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.832
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.832
mgf019085m Mimulus guttatus mgf019085m N 0.832
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.832
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.832
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.832
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.832
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.822
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.822
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.822
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.822
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.822
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.822
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.822
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.822
OS11G0156000 Oryza sativa OS11G0156000 N 0.822
OBART11G03590 Oryza barthii OBART11G03590 N 0.822
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.814
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.812
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.812
ARF31 Arabidopsis thaliana AT2G36080 N 0.812
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.812
Bo01079s020 Brassica oleracea Bo01079s020 N 0.812
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.812
Bra017262 Brassica rapa Bra017262 N 0.812
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.812
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.812
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.812
OB11G12920 Oryza brachyantha OB11G12920 N 0.812
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.806
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.802
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.802
Bo4g035110 Brassica oleracea Bo4g035110 N 0.802
Bra005301 Brassica rapa Bra005301 N 0.802
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.802
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.802
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.802
MDP0000229742 Malus domestica MDP0000229742 N 0.802
mgf018965m Mimulus guttatus mgf018965m N 0.798
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.797
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.792
Bo9g176470 Brassica oleracea Bo9g176470 N 0.792
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.792
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.792
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.792
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.792
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.792
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.792
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.788
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.782
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.782
Ca_00826 Cicer arietinum Ca_00826 N 0.782
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.782
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.782
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.782
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.782
Si027632m.g Setaria italica Si027632m.g N 0.782
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.782
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.782
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.782
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.782
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.778
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.778
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.778
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.775
F775_31255 Aegilops tauschii F775_31255 N 0.774
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.773
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.772
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.772
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.772
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.772
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.772
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.772
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.772
Bra034828 Brassica rapa Bra034828 N 0.772
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.772
OBART12G03490 Oryza barthii OBART12G03490 N 0.772
F775_02500 Aegilops tauschii F775_02500 N 0.772
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.772
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.772
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.772
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.772
Bra001411 Brassica rapa Bra001411 N 0.772
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.772
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.772
Bo3g064320 Brassica oleracea Bo3g064320 N 0.772
Bo5g136360 Brassica oleracea Bo5g136360 N 0.772
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.765
OB04G29740 Oryza brachyantha OB04G29740 I 0.764
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.762
Si020241m.g Setaria italica Si020241m.g N 0.762
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.762
Bra041023 Brassica rapa Bra041023 N 0.762
Bra005886 Brassica rapa Bra005886 N 0.762
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.762
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.762
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.762
Bo3g003800 Brassica oleracea Bo3g003800 N 0.762
Bra009171 Brassica rapa Bra009171 N 0.759
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.759
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.758
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.757
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.752
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.752
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.752
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.752
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.752
Si011823m.g Setaria italica Si011823m.g N 0.752
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.752
OS04G0581400 Oryza sativa OS04G0581400 I 0.752
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.752
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.752
OBART04G22880 Oryza barthii OBART04G22880 I 0.752
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.752
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.752
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.752
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.752
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.747
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.747
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.743
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.743
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.743
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.743
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.743
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.743
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.743
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.743
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.743
OB02G35380 Oryza brachyantha OB02G35380 I 0.743
OB03G11610 Oryza brachyantha OB03G11610 N 0.743
OBART03G01650 Oryza barthii OBART03G01650 N 0.743
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.743
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.743
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.743
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.743
OS03G0120900 Oryza sativa OS03G0120900 N 0.743
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.743
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.737
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.733
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.733
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.733
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.733
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.733
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.733
Si010849m.g Setaria italica Si010849m.g N 0.733
Si036864m.g Setaria italica Si036864m.g N 0.733
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.733
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.733
OBART02G28100 Oryza barthii OBART02G28100 N 0.733
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.733
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.733
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.733
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.733
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.733
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.733
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.733
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.733
OS02G0683500 Oryza sativa OS02G0683500 N 0.733
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.733
TCM_005014 Theobroma cacao TCM_005014 I 0.733
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.733
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.731
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.730
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.730
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.727
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.726
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.723
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.723
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.723
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.723
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.723
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.723
MDP0000138163 Malus domestica MDP0000138163 N 0.723
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.723
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.723
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.723
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.723
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.723
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.723
mgf023769m Mimulus guttatus mgf023769m N 0.723
Pm024248 Prunus mume Pm024248 I 0.723
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.723
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.723
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.722
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.720
Bo4g197410 Brassica oleracea Bo4g197410 I 0.720
OB10G24100 Oryza brachyantha OB10G24100 N 0.718
OLONG_000201 Oryza longistaminata OLONG_000201 N 0.717
Cla014858 Citrullus lanatus Cla014858 N 0.717
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.714
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.713
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.713
OS10G0537100 Oryza sativa OS10G0537100 N 0.713
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.713
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.713
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.713
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.713
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.713
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.713
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.713
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.713
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.713
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.713
OBART10G17010 Oryza barthii OBART10G17010 N 0.713
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.713
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.713
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.713
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.713
Si039972m.g Setaria italica Si039972m.g N 0.713
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.713
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
30076.m004471 Ricinus communis 30076.m004471 I 0.713
Ca_01368 Cicer arietinum Ca_01368 I 0.713
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.713
TCM_015590 Theobroma cacao TCM_015590 I 0.713
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.713
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.713
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.713
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.713
Bra040478 Brassica rapa Bra040478 I 0.710
30068.m002615 Ricinus communis 30068.m002615 I 0.703
Pm028725 Prunus mume Pm028725 N 0.703
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.703
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703
PK21157.1 Cannabis sativa PK21157.1 I 0.703
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.703
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.703
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.703
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.703
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.703
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.701
OB01G36520 Oryza brachyantha OB01G36520 I 0.701
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.700
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.700
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.700
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.700