OPUNC04G20430 (Oryza punctata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OPUNC04G20430 T020397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.770 0.770
NGA4
M06707_2.00 		Arabidopsis thaliana
NHHBDYCAGGTRNHWH
DWDNYACCTGRHVDDN		 Dap-seq
OMalley et al.(2016)
NGA4_col_a 		0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC04G20430.1 B3 111 187

Links

Other B3 family TFs
Other Oryza punctata TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.986
Si036864m.g Setaria italica Si036864m.g N 0.973
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.973
OS04G0581400 Oryza sativa OS04G0581400 I 0.973
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.973
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.973
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.973
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.973
OBART04G22880 Oryza barthii OBART04G22880 I 0.973
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.973
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.973
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.959
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.959
OB03G11610 Oryza brachyantha OB03G11610 N 0.946
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.932
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.932
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.932
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.932
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.929
30076.m004471 Ricinus communis 30076.m004471 I 0.919
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.919
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.919
OB04G29740 Oryza brachyantha OB04G29740 I 0.919
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.905
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.905
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.905
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.905
Pm024248 Prunus mume Pm024248 I 0.905
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.905
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.905
Ca_01368 Cicer arietinum Ca_01368 I 0.905
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.905
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.905
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.905
TCM_005014 Theobroma cacao TCM_005014 I 0.905
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.905
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.892
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.892
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.892
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.892
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.892
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.892
TCM_015590 Theobroma cacao TCM_015590 I 0.892
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.892
MDP0000288808 Malus domestica MDP0000288808 N 0.878
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.878
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.878
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.878
Bra040478 Brassica rapa Bra040478 I 0.878
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.878
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.871
Bra000434 Brassica rapa Bra000434 N 0.865
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.865
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.865
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.865
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.865
Bo4g197410 Brassica oleracea Bo4g197410 I 0.865
PK21157.1 Cannabis sativa PK21157.1 I 0.865
NGA1 Arabidopsis thaliana AT2G46870 N 0.865
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.865
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.851
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.851
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.851
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.851
Bra007646 Brassica rapa Bra007646 N 0.851
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.851
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.851
Bra004501 Brassica rapa Bra004501 N 0.851
OBART10G17010 Oryza barthii OBART10G17010 N 0.851
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.851
Bo6g079210 Brassica oleracea Bo6g079210 N 0.851
OS10G0537100 Oryza sativa OS10G0537100 N 0.851
Bo8g097490 Brassica oleracea Bo8g097490 N 0.851
Pm028725 Prunus mume Pm028725 N 0.851
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.851
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.851
F775_04153 Aegilops tauschii F775_04153 N 0.851
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.851
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.851
NGA3 Arabidopsis thaliana AT1G01030 N 0.838
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.838
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.838
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.838
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.838
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.838
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.838
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.838
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.838
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.838
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.824
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.824
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.824
Bo4g099000 Brassica oleracea Bo4g099000 N 0.824
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.824
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.824
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.811
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.811
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.811
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.811
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.811
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.811
Bo3g001110 Brassica oleracea Bo3g001110 N 0.811
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.811
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.811
Bra033294 Brassica rapa Bra033294 N 0.811
OB01G36520 Oryza brachyantha OB01G36520 I 0.811
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.811
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.811
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.811
Bo9g176470 Brassica oleracea Bo9g176470 N 0.811
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.811
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.809
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.797
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.797
BRADI3G32140 Brachypodium distachyon BRADI3G32140 N 0.797
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.797
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.797
PK04952.1 Cannabis sativa PK04952.1 I 0.797
Bra017262 Brassica rapa Bra017262 N 0.797
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.797
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.797
OB01G12610 Oryza brachyantha OB01G12610 I 0.797
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.797
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.797
Bra005886 Brassica rapa Bra005886 N 0.797
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.797
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.797
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.797
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.797
MDP0000128295 Malus domestica MDP0000128295 N 0.787
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.784
Cla005055 Citrullus lanatus Cla005055 N 0.784
Ca_25633 Cicer arietinum Ca_25633 I 0.784
Thhalv10028783m.g Eutrema salsugineum Thhalv10028783m.g I 0.784
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.784
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.784
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.784
MDP0000229742 Malus domestica MDP0000229742 N 0.784
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.784
OPUNC07G09160 Oryza punctata OPUNC07G09160 N 0.784
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.770
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.770
mgf023686m Mimulus guttatus mgf023686m I 0.770
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.770
Bra034828 Brassica rapa Bra034828 N 0.770
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.770
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.770
Si027632m.g Setaria italica Si027632m.g N 0.770
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.770
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.770
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.770
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.770
OB10G24100 Oryza brachyantha OB10G24100 N 0.769
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.766
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.758
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.757
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.757
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I 0.757
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.757
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.757
F775_31255 Aegilops tauschii F775_31255 N 0.757
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.757
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.757
Bra001411 Brassica rapa Bra001411 N 0.757
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.757
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.757
OS11G0156000 Oryza sativa OS11G0156000 N 0.757
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.757
Bo5g136360 Brassica oleracea Bo5g136360 N 0.757
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.757
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.757
F775_20738 Aegilops tauschii F775_20738 I 0.757
Bo3g064320 Brassica oleracea Bo3g064320 N 0.757
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.757
OBART11G03590 Oryza barthii OBART11G03590 N 0.757
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.743
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
Cagra.23502s0003 Capsella grandiflora Cagra.23502s0003 I 0.743
Carubv10001406m.g Capsella rubella Carubv10001406m.g I 0.743
Bra008552 Brassica rapa Bra008552 I 0.743
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.743
NGA4 Arabidopsis thaliana AT4G01500 D 0.743
Pavir.Fb00403 Panicum virgatum Pavir.Fb00403 N 0.730
F775_21293 Aegilops tauschii F775_21293 I 0.730
OMERI08G03480 Oryza meridionalis OMERI08G03480 N 0.730
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I 0.730
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.724
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.720
SELMODRAFT_59628 Selaginella moellendorffii SELMODRAFT_59628 N 0.716
OPUNC06G00440 Oryza punctata OPUNC06G00440 N 0.716
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.713
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.713
Si011823m.g Setaria italica Si011823m.g N 0.713
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
GRMZM2G027253 Zea mays GRMZM2G027253 N 0.703
OBART03G01650 Oryza barthii OBART03G01650 N 0.703
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.703
Sb07g003880 Sorghum bicolor Sb07g003880 N 0.703
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.703
Bo9g004050 Brassica oleracea Bo9g004050 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.703
Si008509m.g Setaria italica Si008509m.g N 0.703
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.703
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.703
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.703
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.703
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.703
GRMZM2G180168 Zea mays GRMZM2G180168 N 0.703
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.700