CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC04G20430
(
Oryza punctata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OPUNC04G20430
T020397_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.770
0.770
NGA4
M06707_2.00
Arabidopsis thaliana
NHHBDYCAGGTRNHWH
DWDNYACCTGRHVDDN
Dap-seq
OMalley et al.(2016)
NGA4_col_a
0.743
0.743
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC04G20430.1
B3
111
187
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKP
Links
Other
B3
family TFs
Other
Oryza punctata
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR04G18630
Leersia perrieri
LPERR04G18630
N
0.986
BGIOSGA014498
Oryza indica
BGIOSGA014498
I
0.973
BRADI5G19260
Brachypodium distachyon
BRADI5G19260
I
0.973
GRMZM2G098443
Zea mays
GRMZM2G098443
N
0.973
OBART04G22880
Oryza barthii
OBART04G22880
I
0.973
OGLUM04G22780
Oryza glumaepatula
OGLUM04G22780
I
0.973
ONIVA04G22030
Oryza nivara
ONIVA04G22030
I
0.973
ORGLA04G0198400
Oryza glaberrima
ORGLA04G0198400
I
0.973
ORUFI04G24570
Oryza rufipogon
ORUFI04G24570
I
0.973
OS04G0581400
Oryza sativa
OS04G0581400
I
0.973
Si036864m.g
Setaria italica
Si036864m.g
N
0.973
Pavir.Ia04549
Panicum virgatum
Pavir.Ia04549
N
0.959
Pavir.Ib00059
Panicum virgatum
Pavir.Ib00059
N
0.959
OB03G11610
Oryza brachyantha
OB03G11610
N
0.946
GLYMA07G05381
Glycine max
GLYMA07G05381
I
0.932
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
0.932
OMERI02G27240
Oryza meridionalis
OMERI02G27240
N
0.932
OPUNC02G25780
Oryza punctata
OPUNC02G25780
N
0.932
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.929
OB04G29740
Oryza brachyantha
OB04G29740
I
0.919
30076.m004471
Ricinus communis
30076.m004471
I
0.919
Aquca_037_00291
Aquilegia coerulea
Aquca_037_00291
I
0.919
evm.TU.supercontig_57.71
Carica papaya
evm.TU.supercontig_57.71
I
0.919
MLOC_66387
Hordeum vulgare
MLOC_66387
I
0.905
MTR_7g117455
Medicago truncatula
MTR_7g117455
I
0.905
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
0.905
PGSC0003DMG400012222
Solanum tuberosum
PGSC0003DMG400012222
I
0.905
PRUPE_ppa019131mg
Prunus persica
PRUPE_ppa019131mg
I
0.905
TCM_005014
Theobroma cacao
TCM_005014
I
0.905
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
0.905
Traes_6AL_44AA5642C
Triticum aestivum
Traes_6AL_44AA5642C
I
0.905
Traes_6DL_359607E93
Triticum aestivum
Traes_6DL_359607E93
I
0.905
Ca_01368
Cicer arietinum
Ca_01368
I
0.905
Pm024248
Prunus mume
Pm024248
I
0.905
Eucgr.L00348
Eucalyptus grandis
Eucgr.L00348
I
0.905
Gorai.001G150200
Gossypium raimondii
Gorai.001G150200
I
0.905
GLYMA19G45090
Glycine max
GLYMA19G45090
I
0.892
POPTR_0011s15270
Populus trichocarpa
POPTR_0011s15270
I
0.892
TCM_015590
Theobroma cacao
TCM_015590
I
0.892
Ciclev10020450m.g
Citrus clementina
Ciclev10020450m.g
I
0.892
Gorai.007G114200
Gossypium raimondii
Gorai.007G114200
I
0.892
Gorai.008G132400
Gossypium raimondii
Gorai.008G132400
I
0.892
orange1.1g015743m.g
Citrus sinensis
orange1.1g015743m.g
I
0.892
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
0.892
Bra040478
Brassica rapa
Bra040478
I
0.878
VIT_15s0048g02370
Vitis vinifera
VIT_15s0048g02370
I
0.878
Bostr.25993s0080
Boechera stricta
Bostr.25993s0080
N
0.878
Gorai.003G073600
Gossypium raimondii
Gorai.003G073600
I
0.878
MDP0000288808
Malus domestica
MDP0000288808
N
0.878
Thhalv10001555m.g
Eutrema salsugineum
Thhalv10001555m.g
N
0.878
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
0.871
NGA1
Arabidopsis thaliana
AT2G46870
N
0.865
Bo4g197410
Brassica oleracea
Bo4g197410
I
0.865
Bra000434
Brassica rapa
Bra000434
N
0.865
fgenesh2_kg.181__3__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.181__3__AT2G46870.1
N
0.865
fgenesh2_kg.4__2914__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.4__2914__AT2G46870.1
N
0.865
GRMZM2G082227
Zea mays
GRMZM2G082227
N
0.865
Cagra.0050s0013
Capsella grandiflora
Cagra.0050s0013
N
0.865
Carubv10023656m.g
Capsella rubella
Carubv10023656m.g
N
0.865
PK21157.1
Cannabis sativa
PK21157.1
I
0.865
BGIOSGA031489
Oryza indica
BGIOSGA031489
N
0.851
Bo6g079210
Brassica oleracea
Bo6g079210
N
0.851
Bo8g097490
Brassica oleracea
Bo8g097490
N
0.851
Bra004501
Brassica rapa
Bra004501
N
0.851
Bra007646
Brassica rapa
Bra007646
N
0.851
F775_04153
Aegilops tauschii
F775_04153
N
0.851
LPERR10G12990
Leersia perrieri
LPERR10G12990
N
0.851
OBART10G17010
Oryza barthii
OBART10G17010
N
0.851
OGLUM10G17040
Oryza glumaepatula
OGLUM10G17040
N
0.851
ONIVA10G18740
Oryza nivara
ONIVA10G18740
N
0.851
OPUNC10G16940
Oryza punctata
OPUNC10G16940
N
0.851
ORGLA10G0119700
Oryza glaberrima
ORGLA10G0119700
N
0.851
ORUFI10G18030
Oryza rufipogon
ORUFI10G18030
N
0.851
OS10G0537100
Oryza sativa
OS10G0537100
N
0.851
Solyc08g013690.1
Solanum lycopersicum
Solyc08g013690.1
I
0.851
Traes_4DL_D0F3E9568
Triticum aestivum
Traes_4DL_D0F3E9568
N
0.851
Pm028725
Prunus mume
Pm028725
N
0.851
Gorai.008G261100
Gossypium raimondii
Gorai.008G261100
I
0.851
Thhalv10006123m.g
Eutrema salsugineum
Thhalv10006123m.g
I
0.851
AMTR_s00018p00040300
Amborella trichopoda
AMTR_s00018p00040300
N
0.838
NGA3
Arabidopsis thaliana
AT1G01030
N
0.838
NGA3
Arabidopsis lyrata
fgenesh2_kg.1__134__AT1G01030.1
N
0.838
NGA2
Arabidopsis lyrata
fgenesh2_kg.5__2696__AT3G61970.1
N
0.838
GSMUA_Achr1G03600_001
Musa acuminata
GSMUA_Achr1G03600_001
I
0.838
Bostr.13158s0202
Boechera stricta
Bostr.13158s0202
N
0.838
Bostr.5325s0023
Boechera stricta
Bostr.5325s0023
N
0.838
Cagra.1968s0048
Capsella grandiflora
Cagra.1968s0048
N
0.838
Carubv10009540m.g
Capsella rubella
Carubv10009540m.g
N
0.838
Thhalv10008068m.g
Eutrema salsugineum
Thhalv10008068m.g
N
0.838
Bo4g099000
Brassica oleracea
Bo4g099000
N
0.824
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
0.824
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
0.824
TRIUR3_29732
Triticum urartu
TRIUR3_29732
N
0.824
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N
0.824
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
0.824
AT5G06250
Arabidopsis thaliana
AT5G06250
N
0.811
Bo3g001110
Brassica oleracea
Bo3g001110
N
0.811
Bo9g176470
Brassica oleracea
Bo9g176470
N
0.811
Bra033294
Brassica rapa
Bra033294
N
0.811
fgenesh2_kg.6__566__AT5G06250.2
Arabidopsis lyrata
fgenesh2_kg.6__566__AT5G06250.2
N
0.811
GSMUA_Achr6G13140_001
Musa acuminata
GSMUA_Achr6G13140_001
N
0.811
OB01G36520
Oryza brachyantha
OB01G36520
I
0.811
Bostr.13129s0349
Boechera stricta
Bostr.13129s0349
N
0.811
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
0.811
Cagra.2117s0038
Capsella grandiflora
Cagra.2117s0038
I
0.811
Carubv10001689m.g
Capsella rubella
Carubv10001689m.g
I
0.811
Carubv10017696m.g
Capsella rubella
Carubv10017696m.g
I
0.811
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
0.811
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
0.811
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
0.811
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
0.811
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.809
AT3G11580
Arabidopsis thaliana
AT3G11580
N
0.797
Bra005886
Brassica rapa
Bra005886
N
0.797
Bra017262
Brassica rapa
Bra017262
N
0.797
BRADI3G32140
Brachypodium distachyon
BRADI3G32140
N
0.797
GRMZM2G125095
Zea mays
GRMZM2G125095
N
0.797
GSMUA_Achr9G02600_001
Musa acuminata
GSMUA_Achr9G02600_001
I
0.797
OB01G12610
Oryza brachyantha
OB01G12610
I
0.797
PGSC0003DMG400028159
Solanum tuberosum
PGSC0003DMG400028159
N
0.797
scaffold_301330.1
Arabidopsis lyrata
scaffold_301330.1
N
0.797
Solyc10g083210.1
Solanum lycopersicum
Solyc10g083210.1
N
0.797
Traes_1BL_60A56C455
Triticum aestivum
Traes_1BL_60A56C455
I
0.797
Traes_1BL_F14523046
Triticum aestivum
Traes_1BL_F14523046
I
0.797
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
0.797
Bostr.19424s1090
Boechera stricta
Bostr.19424s1090
N
0.797
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
0.797
Lus10021326.g
Linum usitatissimum
Lus10021326.g
N
0.797
PK04952.1
Cannabis sativa
PK04952.1
I
0.797
MDP0000128295
Malus domestica
MDP0000128295
N
0.787
GLYMA02G36090
Glycine max
GLYMA02G36090
I
0.784
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
0.784
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
0.784
OPUNC07G09160
Oryza punctata
OPUNC07G09160
N
0.784
Traes_4DL_59B1C9052
Triticum aestivum
Traes_4DL_59B1C9052
I
0.784
Ca_25633
Cicer arietinum
Ca_25633
I
0.784
Cla005055
Citrullus lanatus
Cla005055
N
0.784
MDP0000229742
Malus domestica
MDP0000229742
N
0.784
Thhalv10021305m.g
Eutrema salsugineum
Thhalv10021305m.g
N
0.784
Thhalv10028783m.g
Eutrema salsugineum
Thhalv10028783m.g
I
0.784
Bra034828
Brassica rapa
Bra034828
N
0.770
GLYMA03G35700
Glycine max
GLYMA03G35700
N
0.770
MTR_7g105370
Medicago truncatula
MTR_7g105370
N
0.770
POPTR_0006s22460
Populus trichocarpa
POPTR_0006s22460
N
0.770
Sb05g003450
Sorghum bicolor
Sb05g003450
N
0.770
NGA4
Arabidopsis lyrata
scaffold_604140.1
I
0.770
Si027632m.g
Setaria italica
Si027632m.g
N
0.770
cassava3990.m1
Manihot esculenta
cassava3990.m1
N
0.770
mgf023686m
Mimulus guttatus
mgf023686m
I
0.770
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
0.770
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
0.770
SapurV1A.1211s0020
Salix purpurea
SapurV1A.1211s0020
N
0.770
OB10G24100
Oryza brachyantha
OB10G24100
N
0.769
OLONG_010584
Oryza longistaminata
OLONG_010584
I
0.766
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
0.758
BGIOSGA034469
Oryza indica
BGIOSGA034469
N
0.757
Bo3g064320
Brassica oleracea
Bo3g064320
N
0.757
Bo5g136360
Brassica oleracea
Bo5g136360
N
0.757
Bra001411
Brassica rapa
Bra001411
N
0.757
BRADI4G25170
Brachypodium distachyon
BRADI4G25170
N
0.757
F775_20738
Aegilops tauschii
F775_20738
I
0.757
F775_31255
Aegilops tauschii
F775_31255
N
0.757
GRMZM5G805685
Zea mays
GRMZM5G805685
N
0.757
OBART11G03590
Oryza barthii
OBART11G03590
N
0.757
OGLUM11G03240
Oryza glumaepatula
OGLUM11G03240
N
0.757
OLONG_005139
Oryza longistaminata
OLONG_005139
N
0.757
ONIVA07G22860
Oryza nivara
ONIVA07G22860
N
0.757
ORGLA11G0033600
Oryza glaberrima
ORGLA11G0033600
N
0.757
ORUFI11G03500
Oryza rufipogon
ORUFI11G03500
N
0.757
OS11G0156000
Oryza sativa
OS11G0156000
N
0.757
Sb08g003550
Sorghum bicolor
Sb08g003550
N
0.757
Traes_5BL_B98E347A8
Triticum aestivum
Traes_5BL_B98E347A8
N
0.757
Traes_5DL_CACDF70D6
Triticum aestivum
Traes_5DL_CACDF70D6
N
0.757
TRIUR3_24850
Triticum urartu
TRIUR3_24850
I
0.757
Pavir.Ea00485
Panicum virgatum
Pavir.Ea00485
I
0.757
NGA4
Arabidopsis thaliana
AT4G01500
D
0.743
Bra008552
Brassica rapa
Bra008552
I
0.743
LPERR11G03050
Leersia perrieri
LPERR11G03050
N
0.743
Traes_3AS_2E5380A2A
Triticum aestivum
Traes_3AS_2E5380A2A
I
0.743
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
0.743
Cagra.23502s0003
Capsella grandiflora
Cagra.23502s0003
I
0.743
Carubv10001406m.g
Capsella rubella
Carubv10001406m.g
I
0.743
F775_21293
Aegilops tauschii
F775_21293
I
0.730
OMERI08G03480
Oryza meridionalis
OMERI08G03480
N
0.730
Traes_4DL_872A1302F
Triticum aestivum
Traes_4DL_872A1302F
I
0.730
Pavir.Fb00403
Panicum virgatum
Pavir.Fb00403
N
0.730
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
0.724
TRIUR3_01515
Triticum urartu
TRIUR3_01515
N
0.720
OPUNC06G00440
Oryza punctata
OPUNC06G00440
N
0.716
SELMODRAFT_59628
Selaginella moellendorffii
SELMODRAFT_59628
N
0.716
GRMZM2G018485
Zea mays
GRMZM2G018485
N
0.713
Sb01g049150
Sorghum bicolor
Sb01g049150
N
0.713
Sb06g026370
Sorghum bicolor
Sb06g026370
N
0.713
Si011823m.g
Setaria italica
Si011823m.g
N
0.713
Traes_2BL_439C794F5
Triticum aestivum
Traes_2BL_439C794F5
N
0.713
Pavir.Ga00960
Panicum virgatum
Pavir.Ga00960
N
0.713
Pavir.J38226
Panicum virgatum
Pavir.J38226
N
0.713
BGIOSGA011738
Oryza indica
BGIOSGA011738
N
0.703
Bo9g004050
Brassica oleracea
Bo9g004050
N
0.703
GRMZM2G027253
Zea mays
GRMZM2G027253
N
0.703
GRMZM2G102059
Zea mays
GRMZM2G102059
N
0.703
GRMZM2G180168
Zea mays
GRMZM2G180168
N
0.703
OBART03G01650
Oryza barthii
OBART03G01650
N
0.703
OGLUM03G01630
Oryza glumaepatula
OGLUM03G01630
N
0.703
OMERI03G01600
Oryza meridionalis
OMERI03G01600
N
0.703
ONIVA02G30750
Oryza nivara
ONIVA02G30750
N
0.703
OPUNC03G01540
Oryza punctata
OPUNC03G01540
N
0.703
ORGLA03G0014300
Oryza glaberrima
ORGLA03G0014300
N
0.703
OS03G0120900
Oryza sativa
OS03G0120900
N
0.703
Sb07g003880
Sorghum bicolor
Sb07g003880
N
0.703
Si008509m.g
Setaria italica
Si008509m.g
N
0.703
Lus10004226.g
Linum usitatissimum
Lus10004226.g
N
0.703
AC216872.3_FG002
Zea mays
AC216872.3_FG002
N
0.700