CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g003880
(
Sorghum bicolor
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Sb07g003880
T021121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g003880.1
B3
57
154
FDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAGTQLCFQDCGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGGGGRYFIEHRH
Links
Other
B3
family TFs
Other
Sorghum bicolor
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G180168
Zea mays
GRMZM2G180168
N
0.908
Si014362m.g
Setaria italica
Si014362m.g
N
0.878
Pavir.Fb00403
Panicum virgatum
Pavir.Fb00403
N
0.878
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.857
OPUNC08G03290
Oryza punctata
OPUNC08G03290
N
0.811
BGIOSGA028020
Oryza indica
BGIOSGA028020
N
0.802
OGLUM08G03520
Oryza glumaepatula
OGLUM08G03520
N
0.802
ONIVA08G03420
Oryza nivara
ONIVA08G03420
N
0.802
ORGLA08G0028800
Oryza glaberrima
ORGLA08G0028800
N
0.802
ORUFI08G03850
Oryza rufipogon
ORUFI08G03850
N
0.802
OS08G0157700
Oryza sativa
OS08G0157700
N
0.802
OMERI08G03480
Oryza meridionalis
OMERI08G03480
N
0.796
LPERR08G03490
Leersia perrieri
LPERR08G03490
N
0.745
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.719
BRADI3G16500
Brachypodium distachyon
BRADI3G16500
N
0.704
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
0.703