BRADI4G42167 (Brachypodium distachyon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 BRADI4G42167 T019015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G42167.1 B3 36 143

Links

Other B3 family TFs
Other Brachypodium distachyon TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.970
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.970
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.970
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.939
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.929
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.909
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.899
F775_02500 Aegilops tauschii F775_02500 N 0.899
OB12G13420 Oryza brachyantha OB12G13420 N 0.899
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.899
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.899
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.899
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.899
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.899
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.891
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.889
OBART11G03590 Oryza barthii OBART11G03590 N 0.889
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.889
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.889
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.889
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.889
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.889
OS11G0156000 Oryza sativa OS11G0156000 N 0.889
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.881
F775_31255 Aegilops tauschii F775_31255 N 0.879
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.879
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.871
Si027632m.g Setaria italica Si027632m.g N 0.869
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.859
OB11G12920 Oryza brachyantha OB11G12920 N 0.851
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.842
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.832
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.829
ARF31 Arabidopsis thaliana AT2G36080 N 0.828
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.828
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.828
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.828
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.828
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.828
PK04952.1 Cannabis sativa PK04952.1 I 0.828
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Bra017262 Brassica rapa Bra017262 N 0.818
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.818
TCM_022729 Theobroma cacao TCM_022729 N 0.818
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.818
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.818
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.818
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.818
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.818
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.812
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.812
Bo4g035110 Brassica oleracea Bo4g035110 N 0.808
Bra005301 Brassica rapa Bra005301 N 0.808
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.808
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.808
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.808
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.808
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.808
30032.m000462 Ricinus communis 30032.m000462 N 0.808
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.808
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.808
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.808
Bo01079s020 Brassica oleracea Bo01079s020 N 0.802
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.798
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.798
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.798
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.798
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.792
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.792
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.792
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.790
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.788
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.788
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.788
OBART12G03490 Oryza barthii OBART12G03490 N 0.788
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.788
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.788
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.788
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.788
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.788
Ca_00826 Cicer arietinum Ca_00826 N 0.788
Ca_25633 Cicer arietinum Ca_25633 I 0.788
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.788
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.788
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.788
MDP0000229742 Malus domestica MDP0000229742 N 0.788
Si010849m.g Setaria italica Si010849m.g N 0.782
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.782
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.778
Bo5g136360 Brassica oleracea Bo5g136360 N 0.778
Bra034828 Brassica rapa Bra034828 N 0.778
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.778
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.778
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.778
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.778
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.778
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.778
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.778
Cla017937 Citrullus lanatus Cla017937 I 0.772
Bo3g064320 Brassica oleracea Bo3g064320 N 0.768
Bra001411 Brassica rapa Bra001411 N 0.768
Bra005886 Brassica rapa Bra005886 N 0.768
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.768
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.768
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.768
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.758
Bo9g176470 Brassica oleracea Bo9g176470 N 0.758
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.758
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.758
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.758
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.758
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.758
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.758
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.758
Bo3g003800 Brassica oleracea Bo3g003800 N 0.752
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.752
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.747
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.747
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.747
mgf019085m Mimulus guttatus mgf019085m N 0.747
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.747
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.743
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.737
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.737
OB03G11610 Oryza brachyantha OB03G11610 N 0.737
OBART10G17010 Oryza barthii OBART10G17010 N 0.737
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.737
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.737
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.737
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.737
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.737
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.737
OS10G0537100 Oryza sativa OS10G0537100 N 0.737
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.737
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.737
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.737
Si036864m.g Setaria italica Si036864m.g N 0.737
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.737
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.737
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.737
Pm024248 Prunus mume Pm024248 I 0.737
Pm028725 Prunus mume Pm028725 N 0.737
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.737
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.737
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.737
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.737
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.737
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.735
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.727
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.727
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.727
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.727
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.727
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.727
OBART04G22880 Oryza barthii OBART04G22880 I 0.727
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.727
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.727
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.727
OS04G0581400 Oryza sativa OS04G0581400 I 0.727
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.727
TCM_005014 Theobroma cacao TCM_005014 I 0.727
TCM_015590 Theobroma cacao TCM_015590 I 0.727
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.727
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.727
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.727
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.727
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.727
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.727
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.727
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.723
OBART03G01650 Oryza barthii OBART03G01650 N 0.723
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.723
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.723
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.723
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.723
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.723
OS03G0120900 Oryza sativa OS03G0120900 N 0.723
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.723
Si011823m.g Setaria italica Si011823m.g N 0.723
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.723
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.719
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.717
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.717
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.717
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.717
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.717
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.717
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.717
30068.m002615 Ricinus communis 30068.m002615 I 0.717
mgf018965m Mimulus guttatus mgf018965m N 0.717
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.717
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.717
Bra041023 Brassica rapa Bra041023 N 0.713
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.713
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.713
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.713
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.713
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.713
Bra040478 Brassica rapa Bra040478 I 0.707
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.707
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.707
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.707
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.707
30076.m004471 Ricinus communis 30076.m004471 I 0.707
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.707
mgf023769m Mimulus guttatus mgf023769m N 0.707
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.707
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.707
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.707
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.707
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.707
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.707
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.707
OB10G24100 Oryza brachyantha OB10G24100 N 0.705
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
OB02G35380 Oryza brachyantha OB02G35380 I 0.703
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.703
Si020241m.g Setaria italica Si020241m.g N 0.703
Si039972m.g Setaria italica Si039972m.g N 0.703
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.703
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.703
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.703
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
PK11025.1 Cannabis sativa PK11025.1 I 0.703
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.701