CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g002230
(
Brassica oleracea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bo1g002230
T024527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g002230.1
BBR
1
282
MESDGRYNPDYYKEGTHSVWNTMPNHHQTKEDQHNALVMNQKIMSILAERDAALKERDDALAAKQEALAARDEALDQRDKALSLRDNAILERDSALSALQFREHNLNYILSRAKLGSSHLSNPSPLSTIPHEAAPSKRKKKRKPETRSKGKRVGEDLNHHVASPGKKCRKDWDSNVVGLNLVTFDETTMPVPMCTCTGTARHCYKWGNGGWQSSCCTTTLSLYPLPQMPNKRHSRVGGRKMSGNVFSRLLSRLAGQGHDLSSPVDLKDYWARHGTNRYITIM
Links
Other
BBR
family TFs
Other
Brassica oleracea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00185p00053620
Amborella trichopoda
AMTR_s00185p00053620
I
0.745
BPC5
Arabidopsis thaliana
AT4G38910
D
0.704
Bo3g149640
Brassica oleracea
Bo3g149640
I
0.936
Bo7g119540
Brassica oleracea
Bo7g119540
I
0.723
Bostr.25542s0071
Boechera stricta
Bostr.25542s0071
I
0.708
Bra010720
Brassica rapa
Bra010720
N
0.734
Bra011886
Brassica rapa
Bra011886
N
0.891
Bra033583
Brassica rapa
Bra033583
N
0.708
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.818
Thhalv10025867m.g
Eutrema salsugineum
Thhalv10025867m.g
I
0.766