CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BPC7
(
Arabidopsis lyrata
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
fgenesh2_kg.4__1574__AT2G35550.4
T024601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__1574__AT2G35550.4
BBR
5
226
PSQNLMLSATNANKGAGLRTSNAHWLHSCIAVPKTTGIDLSQANPAEGVMVPQSHLFPPPTRDSRNDMETVKQKSVNQSPLKSLKPNPPRKKRSASNKSKKTLSIPETKREKKNLDINIDISSFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPRVRLAGRKMSNGAYVKLLARLAGEGYNLSHPVDLKNHWARHGTNKFVTIK
Links
Other
BBR
family TFs
Other
Arabidopsis lyrata
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
21409_YPL230W
Saccharomyces mikatae
21409_YPL230W
I
21995_YPL230W
Saccharomyces paradoxus
21995_YPL230W
I
24535_YPL230W
Saccharomyces bayanus
24535_YPL230W
I
AACERI_AaceriAFL136W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL136W
I
AGOS_AFL136W
Ashbya gossypii
AGOS_AFL136W
I
Ecym_2159
Eremothecium cymbalariae
Ecym_2159
I
KAFR_0A07120
Kazachstania africana
KAFR_0A07120
I
KNAG_0D00900
Kazachstania naganishii
KNAG_0D00900
I
KNAG_0F01710
Kazachstania naganishii
KNAG_0F01710
I
KTB10507.1
Candida glabrata
KTB10507.1
D
SAKL0A03476g
Lachancea kluyveri
SAKL0A03476g
I
SKUD_109001
Saccharomyces kudriavzevii
SKUD_109001
I
USV1
Saccharomyces cerevisiae
YPL230W
D