21409_YPL230W (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 21409_YPL230W T145947_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USV1
M01538_2.00 		Saccharomyces cerevisiae
NYCCCTKD
HMAGGGRN		 PBM
Zhu et al.(2009)
Usv1 		0.827 0.978
USV1
M00041_2.00 		Saccharomyces cerevisiae
NCCCCTGD
HCAGGGGN		 PBM
Badis et al.(2008)
YPL230W_2051 		0.827 0.978
USV1
M08544_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YPL230W_509 		0.827 0.978
KTB10507.1
M01040_2.00 		Candida glabrata
NBCCCTKR
YMAGGGVN		 PBM
Siggers et al.(2014)
CAGL0L00583gCgla 		0.765 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
21409_YPL230W C2H2 ZF 41 66
21409_YPL230W C2H2 ZF 72 95

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SKUD_109001 Saccharomyces kudriavzevii SKUD_109001 I 0.827
USV1 Saccharomyces cerevisiae YPL230W D 0.827
21995_YPL230W Saccharomyces paradoxus 21995_YPL230W I 0.827
24535_YPL230W Saccharomyces bayanus 24535_YPL230W I 0.827
NCAS_0G01270 Naumovozyma castellii NCAS_0G01270 I 0.810
KNAG_0F01710 Kazachstania naganishii KNAG_0F01710 I 0.805
SAKL0A03476g Lachancea kluyveri SAKL0A03476g I 0.785
AACERI_AaceriAFL136W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL136W I 0.779
AGOS_AFL136W Ashbya gossypii AGOS_AFL136W I 0.779
Ecym_2159 Eremothecium cymbalariae Ecym_2159 I 0.779
KAFR_0A07120 Kazachstania africana KAFR_0A07120 I 0.771
KNAG_0D00900 Kazachstania naganishii KNAG_0D00900 I 0.771
KTB10507.1 Candida glabrata KTB10507.1 D 0.765