CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM10G00620
(
Oryza glumaepatula
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
OGLUM10G00620
T024669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM10G00620.1
BBR
1
341
MDDDASMSIRWGGFFESPARNLGLQLMSSVPADRDTKQLLSGSPFLHHQHQQHVPHHHHQPHHPRDCGANGNANGGAMPPSPATEAPPSMPMNFVRSDMWMHPQQQQQHHHPREHKALHNLTVGHGSSHIAHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPLPQQPKEECISSPLIEENVPVIDEPPPPKKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAPAPRRRGPRKNIGMVINGIDLDLSRIPTPICSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Oryza glumaepatula
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.000
NAC090
Arabidopsis thaliana
AT5G22380
N
0.000
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
0.000
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.000
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.000
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.000
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.000
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.000
Bra002408
Brassica rapa
Bra002408
N
0.000
Bra006624
Brassica rapa
Bra006624
N
0.000
Bra020188
Brassica rapa
Bra020188
N
0.000
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.000
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.000
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.000
Ca_00818
Cicer arietinum
Ca_00818
N
0.000
Cla018691
Citrullus lanatus
Cla018691
N
0.000
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.000
F775_13455
Aegilops tauschii
F775_13455
N
0.000
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.000
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.000
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.000
GRMZM2G465835
Zea mays
GRMZM2G465835
N
0.000
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.000
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.000
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
0.000
MLOC_60153
Hordeum vulgare
MLOC_60153
N
0.000
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.000
OB11G12830
Oryza brachyantha
OB11G12830
N
0.000
OB12G13350
Oryza brachyantha
OB12G13350
N
0.000
OBART11G03530
Oryza barthii
OBART11G03530
N
0.000
OBART12G03440
Oryza barthii
OBART12G03440
N
0.000
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
0.000
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.000
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
0.000
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
0.000
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.000
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
0.000
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.000
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
0.000
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.000
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
0.000
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.000
OS11G0154500
Oryza sativa
OS11G0154500
N
0.000
OS12G0156100
Oryza sativa
OS12G0156100
N
0.000
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.000
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.000
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.000
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.000
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
0.000
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.000
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.000
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.000
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.000
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.000
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.000
Sb09g021780
Sorghum bicolor
Sb09g021780
N
0.000
Si022966m.g
Setaria italica
Si022966m.g
N
0.000
Si025833m.g
Setaria italica
Si025833m.g
N
0.000
Si026707m.g
Setaria italica
Si026707m.g
N
0.000
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.000
TRIUR3_33275
Triticum urartu
TRIUR3_33275
N
0.000