CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo2g023870
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo2g023870
T292318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo2g023870.1
NAC/NAM
6
137
TIGFRFYPTEDELIAFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGERCRGDAEQWFFFVPRQEREARGGRPNRTTDSGYWKATGSPGPVISKDNRMIGVKKTMVFYTGKAPTGRKTKWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra020188
Brassica rapa
Bra020188
N
0.995
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.995
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.994
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.994
Bra002408
Brassica rapa
Bra002408
N
0.994
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.994
Bra006624
Brassica rapa
Bra006624
N
0.993
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.993
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.993
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.993
NAC090
Arabidopsis thaliana
AT5G22380
N
0.992
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.955
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.954
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.954
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.953
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.953
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.952
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.950
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.950
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.950
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.949
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.948
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.943
Eucgr.I00583
Eucalyptus grandis
Eucgr.I00583
N
0.942
Eucgr.J00509
Eucalyptus grandis
Eucgr.J00509
N
0.941
Eucgr.J00516
Eucalyptus grandis
Eucgr.J00516
N
0.935
Thhalv10010503m.g
Eutrema salsugineum
Thhalv10010503m.g
N
0.934
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.931
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.931
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.930
anac061
Arabidopsis thaliana
AT3G44350
N
0.929
anac061
Arabidopsis lyrata
Al_scaffold_0005_1163
N
0.928
Bostr.0556s0732
Boechera stricta
Bostr.0556s0732
N
0.928
Cagra.2192s0006
Capsella grandiflora
Cagra.2192s0006
N
0.928
Carubv10017870m.g
Capsella rubella
Carubv10017870m.g
N
0.928
Bo3g122200
Brassica oleracea
Bo3g122200
N
0.927
Bra019442
Brassica rapa
Bra019442
N
0.927
TRIUR3_33275
Triticum urartu
TRIUR3_33275
N
0.926
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.924
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.924
F775_13455
Aegilops tauschii
F775_13455
N
0.919
Traes_5DL_43FC1B296
Triticum aestivum
Traes_5DL_43FC1B296
N
0.919
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.918
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.918
MLOC_60153
Hordeum vulgare
MLOC_60153
N
0.917
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.913
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.912
gene21734-v1.0-hybrid
Fragaria vesca
gene21734-v1.0-hybrid
N
0.911
SapurV1A.0450s0140
Salix purpurea
SapurV1A.0450s0140
N
0.911
SapurV1A.1671s0050
Salix purpurea
SapurV1A.1671s0050
N
0.911
Cla018691
Citrullus lanatus
Cla018691
N
0.910
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.910
TCM_041364
Theobroma cacao
TCM_041364
N
0.909
30055.m001588
Ricinus communis
30055.m001588
N
0.909
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.909
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.907
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.906
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.906
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.906
Bo3g123480
Brassica oleracea
Bo3g123480
N
0.905
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.905
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.899
Ca_00818
Cicer arietinum
Ca_00818
N
0.899
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.899
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.898
OB12G13350
Oryza brachyantha
OB12G13350
N
0.898
OBART12G03440
Oryza barthii
OBART12G03440
N
0.898
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.898
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.898
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.898
OS12G0156100
Oryza sativa
OS12G0156100
N
0.898
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.897
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.897
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.896
Bra019459
Brassica rapa
Bra019459
N
0.895
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.894
PK27925.1
Cannabis sativa
PK27925.1
N
0.894
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.893
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.893
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.892
MDP0000205938
Malus domestica
MDP0000205938
N
0.892
Cla008777
Citrullus lanatus
Cla008777
N
0.890
GRMZM2G465835
Zea mays
GRMZM2G465835
N
0.888
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.888
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.887
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.887
Pm001403
Prunus mume
Pm001403
N
0.887
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.885
POPTR_0001s22630
Populus trichocarpa
POPTR_0001s22630
N
0.884
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.884
Sb09g021780
Sorghum bicolor
Sb09g021780
N
0.881
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.880
Si002586m.g
Setaria italica
Si002586m.g
N
0.878
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
0.878
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.877
MDP0000130797
Malus domestica
MDP0000130797
N
0.877
MDP0000759504
Malus domestica
MDP0000759504
N
0.877
VIT_06s0080g00780
Vitis vinifera
VIT_06s0080g00780
N
0.875
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.874
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.874
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.873
Pavir.J36282
Panicum virgatum
Pavir.J36282
N
0.873