CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g123480
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo3g123480
T292372_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g123480.1
NAC/NAM
7
137
PVGFRFYPTEVELISFYLRIQLDGGHATIYSLIPILDVFNVEPTQLPNLAGERCQGDREQWLFFVPRQEREARGGRPSRTTNSGYWKATGSPGPVFSPDNRVIGVKKTMVFYIGKAPKGRKTKWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra019459
Brassica rapa
Bra019459
N
0.992
Bo3g122200
Brassica oleracea
Bo3g122200
N
0.987
Bra019442
Brassica rapa
Bra019442
N
0.987
anac061
Arabidopsis lyrata
Al_scaffold_0005_1163
N
0.986
Bostr.0556s0732
Boechera stricta
Bostr.0556s0732
N
0.986
Cagra.2192s0006
Capsella grandiflora
Cagra.2192s0006
N
0.986
Carubv10017870m.g
Capsella rubella
Carubv10017870m.g
N
0.986
Thhalv10010503m.g
Eutrema salsugineum
Thhalv10010503m.g
N
0.986
anac061
Arabidopsis thaliana
AT3G44350
N
0.982
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.908
Bra002408
Brassica rapa
Bra002408
N
0.908
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.905
Bra020188
Brassica rapa
Bra020188
N
0.905
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.904
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.903
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.903
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.901
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.901
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.899
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.898
NAC090
Arabidopsis thaliana
AT5G22380
N
0.895
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.895
Bra006624
Brassica rapa
Bra006624
N
0.887
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.878
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.873
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.871