CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra019442
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra019442
T292594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra019442.1-P
NAC/NAM
6
136
PVGFRFYPTEVELISFYLRFQLNGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWLFFVPRQEREARGGRPSRTTGLGYWKATGSPGPVFSPDNRVIGVKKTMVFYIGKAPTGRKTKWKMNEYKG
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g122200
Brassica oleracea
Bo3g122200
N
0.993
Thhalv10010503m.g
Eutrema salsugineum
Thhalv10010503m.g
N
0.991
anac061
Arabidopsis lyrata
Al_scaffold_0005_1163
N
0.990
Bostr.0556s0732
Boechera stricta
Bostr.0556s0732
N
0.990
Cagra.2192s0006
Capsella grandiflora
Cagra.2192s0006
N
0.990
Carubv10017870m.g
Capsella rubella
Carubv10017870m.g
N
0.990
anac061
Arabidopsis thaliana
AT3G44350
N
0.988
Bo3g123480
Brassica oleracea
Bo3g123480
N
0.987
Bra019459
Brassica rapa
Bra019459
N
0.985
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.932
Bra002408
Brassica rapa
Bra002408
N
0.930
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.930
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.930
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.927
Bra020188
Brassica rapa
Bra020188
N
0.927
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.926
NAC090
Arabidopsis thaliana
AT5G22380
N
0.923
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.923
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.920
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.920
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.915
Bra006624
Brassica rapa
Bra006624
N
0.914
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.900
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.895
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.888
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.888
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.886