Carubv10022023m.g (Capsella rubella)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Carubv10022023m.g T024836_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022023m BBR 1 286

Links

Other BBR family TFs
Other Capsella rubella TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.26959s0086 Boechera stricta Bostr.26959s0086 N 0.728
Cagra.1111s0005 Capsella grandiflora Cagra.1111s0005 N 1.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.714
Thhalv10018977m.g Eutrema salsugineum Thhalv10018977m.g N 0.706
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.788