Traes_4BL_011308A76 (Triticum aestivum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 Traes_4BL_011308A76 T024759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC1
M06715_2.00 		Arabidopsis thaliana
GAGAGAGAGAGAGAGAGAGAGAGA
TCTCTCTCTCTCTCTCTCTCTCTC		 Dap-seq
OMalley et al.(2016)
BPC1_col_a 		0.798 0.798
BPC1
M06716_2.00 		Arabidopsis thaliana
RAGAGAGAGARAGAR
YTCTYTCTCTCTCTY		 Dap-seq
OMalley et al.(2016)
BPC1_colamp_a 		0.798 0.798
BPC1
M09775_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BPC1_Q2 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BL_011308A76.1 BBR 1 99

Links

Other BBR family TFs
Other Triticum aestivum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.976
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.949
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.949
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.949
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.939
GRMZM2G166230 Zea mays GRMZM2G166230 N 0.939
OB10G10650 Oryza brachyantha OB10G10650 N 0.939
OBART10G00640 Oryza barthii OBART10G00640 N 0.939
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.939
OGLUM10G00630 Oryza glumaepatula OGLUM10G00630 N 0.939
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.939
ORUFI10G00640 Oryza rufipogon ORUFI10G00640 N 0.939
OS10G0114500 Oryza sativa OS10G0114500 N 0.939
OS10G0115200 Oryza sativa OS10G0115200 N 0.939
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.939
Si029480m.g Setaria italica Si029480m.g N 0.929
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.919
ONIVA10G01090 Oryza nivara ONIVA10G01090 N 0.909
Aquca_002_01194 Aquilegia coerulea Aquca_002_01194 N 0.899
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.889
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.889
ORUFI10G00650 Oryza rufipogon ORUFI10G00650 N 0.879
OS10G0115500 Oryza sativa OS10G0115500 N 0.879
Solyc04g008380.2 Solanum lycopersicum Solyc04g008380.2 N 0.879
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.859
POPTR_0015s05200 Populus trichocarpa POPTR_0015s05200 N 0.859
VIT_17s0000g01860 Vitis vinifera VIT_17s0000g01860 N 0.859
Ca_22170 Cicer arietinum Ca_22170 N 0.859
29780.m001393 Ricinus communis 29780.m001393 N 0.859
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.859
mgf007544m Mimulus guttatus mgf007544m N 0.859
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.859
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.859
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.859
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.859
LjSGA_029364.2 Lotus japonicus LjSGA_029364.2 N 0.859
GLYMA07G12150 Glycine max GLYMA07G12150 N 0.848
GLYMA07G12160 Glycine max GLYMA07G12160 N 0.848
OGLUM10G00640 Oryza glumaepatula OGLUM10G00640 N 0.848
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.848
POPTR_0015s05210 Populus trichocarpa POPTR_0015s05210 N 0.848
TCM_011212 Theobroma cacao TCM_011212 N 0.848
Eucgr.H00573 Eucalyptus grandis Eucgr.H00573 N 0.848
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.848
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.848
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.838
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.838
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.838
MDP0000320521 Malus domestica MDP0000320521 N 0.838
MDP0000826219 Malus domestica MDP0000826219 N 0.838
SapurV1A.0074s0330 Salix purpurea SapurV1A.0074s0330 N 0.838
PK28293.1 Cannabis sativa PK28293.1 N 0.838
GLYMA09G30040 Glycine max GLYMA09G30040 N 0.828
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.828
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.818
Gorai.012G183200 Gossypium raimondii Gorai.012G183200 N 0.818
Bo5g019930 Brassica oleracea Bo5g019930 N 0.808
Bra026196 Brassica rapa Bra026196 N 0.808
PGSC0003DMG400026958 Solanum tuberosum PGSC0003DMG400026958 N 0.808
POPTR_0012s03750 Populus trichocarpa POPTR_0012s03750 N 0.808
Cla005912 Citrullus lanatus Cla005912 N 0.808
Cucsa.026590 Cucumis sativus Cucsa.026590 N 0.808
Cagra.3834s0005 Capsella grandiflora Cagra.3834s0005 I 0.808
BPC2 Arabidopsis thaliana AT1G14685 N 0.798
BPC1 Arabidopsis thaliana AT2G01930 D 0.798
Bo8g106640 Brassica oleracea Bo8g106640 N 0.798
Bra026813 Brassica rapa Bra026813 N 0.798
BPC2 Arabidopsis lyrata fgenesh2_kg.1__1602__AT1G14685.1 I 0.798
Cagra.3501s0027 Capsella grandiflora Cagra.3501s0027 N 0.798
Carubv10009978m.g Capsella rubella Carubv10009978m.g N 0.798
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.798
Thhalv10008428m.g Eutrema salsugineum Thhalv10008428m.g N 0.798
BPC3 Arabidopsis thaliana AT1G68120 N 0.788
Cagra.1111s0005 Capsella grandiflora Cagra.1111s0005 N 0.788
Carubv10022023m.g Capsella rubella Carubv10022023m.g N 0.788
Bo2g057480 Brassica oleracea Bo2g057480 N 0.778
Bra016686 Brassica rapa Bra016686 N 0.778
Bra033959 Brassica rapa Bra033959 N 0.778
Bostr.26959s0086 Boechera stricta Bostr.26959s0086 N 0.778
mgf023519m Mimulus guttatus mgf023519m N 0.768
Thhalv10018977m.g Eutrema salsugineum Thhalv10018977m.g N 0.768
OS03G0237401 Oryza sativa OS03G0237401 N 0.765
AMTR_s00024p00090860 Amborella trichopoda AMTR_s00024p00090860 N 0.758
Bostr.23794s0547 Boechera stricta Bostr.23794s0547 N 0.707
Cagra.0993s0065 Capsella grandiflora Cagra.0993s0065 N 0.707