MDP0000826219 (Malus domestica)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 MDP0000826219 T024876_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000826219 BBR 12 290

Links

Other BBR family TFs
Other Malus domestica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
MDP0000320521 Malus domestica MDP0000320521 N 0.930
Pm005924 Prunus mume Pm005924 N 0.915
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.911
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.838
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.828
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.824
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.824
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.816
29780.m001393 Ricinus communis 29780.m001393 N 0.813
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.810
PK28293.1 Cannabis sativa PK28293.1 N 0.788
TCM_011212 Theobroma cacao TCM_011212 N 0.781
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.775
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.774
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.770
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.770
Cla005911 Citrullus lanatus Cla005911 N 0.768
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.763
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.762
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.760
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.756
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.753
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.752
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.749
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.741
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.739
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.738
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.731
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.722
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.719