Ciclev10015354m.g (Citrus clementina)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Ciclev10015354m.g T024842_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10015354m BBR 132 423

Links

Other BBR family TFs
Other Citrus clementina TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.993
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.809
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.799
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.799
29780.m001393 Ricinus communis 29780.m001393 N 0.792
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.781
TCM_011212 Theobroma cacao TCM_011212 N 0.781
Pm005924 Prunus mume Pm005924 N 0.781
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.770
MDP0000826219 Malus domestica MDP0000826219 N 0.770
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.756
MDP0000320521 Malus domestica MDP0000320521 N 0.753
PK28293.1 Cannabis sativa PK28293.1 N 0.753
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.749
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.746
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.739
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.735
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.735
Cla005911 Citrullus lanatus Cla005911 N 0.731
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.731
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.731
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.731
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.721
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.717
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.717
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.714
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.703
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.703