PK28293.1 (Cannabis sativa)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 PK28293.1 T024913_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK28293.1 BBR 53 336

Links

Other BBR family TFs
Other Cannabis sativa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 1.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 1.000
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.838
Pm005924 Prunus mume Pm005924 N 0.822
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.813
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.810
29780.m001393 Ricinus communis 29780.m001393 N 0.810
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.806
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.794
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.794
MDP0000826219 Malus domestica MDP0000826219 N 0.788
MDP0000320521 Malus domestica MDP0000320521 N 0.780
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.774
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.768
TCM_011212 Theobroma cacao TCM_011212 N 0.755
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.753
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.753
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.751
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.749
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.747
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.744
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.736
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.733
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.731
Cla005911 Citrullus lanatus Cla005911 N 0.728
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.714
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.712
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.708
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.706