CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA10G01090
(
Oryza nivara
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
ONIVA10G01090
T024680_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA10G01090.1
BBR
5
234
PAATEAPPSMPMNFVRNDIWMHPQQQHHHHPREPKMMQHQPEPQPQPQPPPSPPHPKEECISLPLMEENVPVISEPPPPKKRQQGRQPKVPRPKKPKKPAAPREDGAPPSAPAPRRRGPMKNIGMVINGIDLDLSRIPTSICSCTGAPQQCYRWGAGGWQSACCTTTVSTYPLPMSTKRHGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Oryza nivara
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
1.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.909
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
0.856
OMERI10G00690
Oryza meridionalis
OMERI10G00690
N
0.826
BGIOSGA032378
Oryza indica
BGIOSGA032378
N
0.812
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.812
OBART10G00640
Oryza barthii
OBART10G00640
N
0.808
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.808
OS10G0114500
Oryza sativa
OS10G0114500
N
0.808
OS10G0115200
Oryza sativa
OS10G0115200
N
0.808
OS10G0115500
Oryza sativa
OS10G0115500
N
0.786
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.782
OB10G10650
Oryza brachyantha
OB10G10650
N
0.777
OGLUM10G00640
Oryza glumaepatula
OGLUM10G00640
N
0.777
OBART10G00650
Oryza barthii
OBART10G00650
N
0.761
OS03G0237401
Oryza sativa
OS03G0237401
N
0.706